Input sequence

Protein name HLA class II histocompatibility antigen, DM alpha chain
Organism Homo sapiens Length 261
Disorder content 14.6% ProS content 11.9%
IDEAL NA UniProt P28067

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 261 1-31 32-220 221-225 226-254 255-261 32-220 226-254 1-31 255-261 8-31 255-261 39-225 39-225 41-124 133-214 136-217 42-110 40-121 123-219 11-21 238-252 232-254 1hdmA(1-184) 9e-106 97.86% 1hdmA(1-184) 1e-54 97.86% PF00993 7.4e-17 66.6% PF07654 2.7e-16 64.7% 1d2oA1(4-82) 1e-09 12.2% 1a6aA2(1-71) 5e-06 26.76% d.19.1 1.5e-26 89.9% b.1.1 5.5e-16 48.4%

Sequence

MGHEQNQGAALLQMLPLLWLLPHSWAVPEAPTPMWPDDLQNHTFLHTVYCQDGSPSVGLS
EAYDEDQLFFFDFSQNTRVPRLPEFADWAQEQGDAPAILFDKEFCEWMIQQIGPKLDGKI
PVSRGFPIAEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNWHDHSVPVEGFGPTFVSAVD
GLSFQAFSYLNFTPEPSDIFSCIVTHEIDRYTAIAYWVPRNALPSDLLENVLCGVAFGLG
VLGIIVGIVLIIYFRKPCSGD

Region:1-261
Length:261aa
Label:Full sequence
Reset:click