Input sequence

Protein name Voltage-dependent L-type calcium channel subunit alpha-1D
Organism Rattus norvegicus Length 2203
Disorder content 35.2% ProS content 24.0%
IDEAL NA UniProt P27732

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2203 1-100 101-220 221-230 231-452 453-558 559-848 849-915 916-1667 1668-2095 2096-2139 2140-2203 101-220 231-452 559-848 916-1667 2096-2139 1-100 221-230 453-558 849-915 1668-2095 2140-2203 1-13 20-60 90-96 453-479 489-503 509-558 849-869 878-884 900-915 1668-1677 1683-1709 1720-1737 1766-1773 1793-1827 1837-1882 1890-1923 1931-1946 1958-1977 2020-2053 2062-2068 2075-2095 2140-2177 2187-2203 1592-1666 420-448 1591-1666 1509-1618 413-448 164-405 1298-1507 620-809 981-1172 1642-1669 163-405 616-810 980-1210 1298-1507 1582-1699 1260-1377 579-688 122-267 941-1035 75-414 558-835 875-1219 1251-1511 1508-1668 1-10 54-67 451-460 562-576 694-705 708-726 825-840 878-899 1038-1052 1187-1201 1424-1432 1708-1720 1781-1787 1889-1899 1944-1964 1980-1995 2181-2192 807-848 130-147 167-189 196-218 272-294 351-373 383-405 578-600 620-642 709-731 781-803 941-963 983-1005 1012-1031 1074-1096 1190-1212 1257-1279 1299-1318 1393-1412 1485-1507 3g43E(2-68) 8e-27 82.67% 4deyB(1-29) 7e-10 100.0% 3g43E(1-68) 7e-20 81.58% 2kavA(1-106) 1e-17 25.23% 4dexB(1-36) 1e-09 50.0% PF00520(2-198) 1e-34 38.43% PF00520(1-198) 7e-27 32.57% PF00520(5-197) 2e-17 37.19% PF00520(2-170) 2e-16 34.34% PF08763(1-28) 8e-10 96.43% PF00520 6.2e-70 242.9% PF00520 1.9e-59 208.1% PF00520 4.1e-68 236.9% PF00520 3.3e-76 263.8% 2ffjA1(27-148) 1e-18 15.32% 1orsC(2-115) 9e-18 9.24% 1orsC(3-108) 3e-11 14.41% 1orsC(2-125) 5e-09 13.7% 1orsC(2-91) 1e-05 9.47% f.14.1 8.9e-37 127.8% f.14.1 1.8e-32 112.8% f.14.1 2.4e-33 115.8% f.14.1 7.1e-35 121.2% a.39.1 0.0003 14.3%

Sequence

MMMMMMMKKMQHQRQQQEDHANEANYARGTRLPISGEGPTSQPNSSKQTVLSWQAAIDAA
RQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACI
SIVDWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKI
IASGLLLHPNASVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALR
AFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKT
CFFADSDIVAEEDPAPCAFSGNGRQCAANGTECRSGWVGPNGGITNFDNFAFAMLTVFQC
ITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARG
DFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS
GEGETQGCCGSLWCWWKRRGAAKTGPSGCRRWGQAISKSKLRSHGAREALCVCRCSLESL
VKLWTSRFSAHLQAAYVRPYSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTIS
SEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITE
TILVELELMSPLGVSVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFI
IIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGP
SSSGMIVCIYFIILFICGNYILLKLFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKE
SLENKKNNKPEVNQIANSDNKVTIDDYQEEAEDKDPYPPCDVPVGEEEEEEEEDEPEVPA
GPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHIFTNLILVFIMLSSA
ALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDML
VVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIV
TTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSD
FNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPVYNYRVEISIFFIIYIIIVAF
FMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYV
VNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKP
KGYFSDAWNTFDSLIVIGSIIDVALSEADNSEESNRISITFFRLFRVMRLVKLLSRGEGI
RTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAV
LLLFRCATGEAWQEIMLACLPGKLCDPDSDYNPGEEYTCGSNFAIVYFISFYMLCAFLII
NLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPL
GFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAV
IKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNT
TIALQAGLRTLHDIGPEIRRAISCDLQDDEPEDSKPEEEDVFKRNGALLGNYVNHVNSDR
RESLQQTNTTHRPLHVQRPSIPPASDTEKPLFPPAGNSVCHNHHNHNSIGKQVPTSTNAN
LNNANMSKAAHGKRPSIGDLEHVSENGHYSYKHDRELQRRSSIKRTRYYETYIRSESGDE
QLPTIFREDPEIHGYFRDPRCFGEQEYFSSEECCEDDSSPTWSRQNYSYYNRYPGSSMDF
ERPRGYHHPQGFLEDDDSPIGYDSRRSPRRRLLPPTPPSHRRSSFNFECLRRQNSQDDVL
PSPALPHRAALPLHLMQQQIMAVAGLDSSKAQKYSPSHSTRSWATPPATPPYRDWTPCYT
PLIQVDRSESMDQVNGSLPSLHRSSWYTDEPDISYRTFTPASLTVPSSFRNKNSDKQRSA
DSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTIDEMESAASTLLNGSVCPRANGD
MGPISHRQDYELQDFGPGYSDEEPDPGREEEDLADEMICITTL

Region:1-2203
Length:2203aa
Label:Full sequence
Reset:click