Input sequence

Protein name CD44 antigen
Organism Rattus norvegicus Length 503
Disorder content 66.6% ProS content 44.5%
IDEAL NA UniProt P26051

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 503 1-19 20-161 162-410 411-436 437-503 20-161 411-436 1-19 162-410 437-503 1-19 162-167 194-206 211-228 236-323 349-373 405-410 437-453 468-476 481-503 28-172 28-172 34-123 34-123 28-172 23-171 12-27 412-426 411-433 2jcpA(6-150) 3e-77 92.41% 2jcpA(6-150) 5e-54 92.41% PF00193(1-92) 5e-09 38.04% PF00193 7.3e-42 149.7% 1uuhA(6-149) 3e-47 86.9% d.169.1 8.6e-51 173.2%

Sequence

MDKVWWHTAWGLLCLLQLSLAQQQIDLNITCRYAGVFHVEKNGRYSISRTEAADLCEAFN
TTLPTMAQMELALRKGFETCRYGFIEGHVVIPRIHPNAICAANNTGVYILLASNTSHYDT
YCFNASAPLEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDIDASNIIDE
DVSSGSTIEKSTPEGYILHTDLPTSQPTGDRDDAFFIGSTLATIATTPWVSAHTKQNQER
TQWNPIHSNPEVLLQTTTRMTDIDRNSTSAHGENWTQEPQPPFNNHEYQDEEETPHATST
TWADPNSTTEEAATQKEKWFENEWQGKNPPTPSEDSHVTEGTTASAHNNHPSQRMTTQSQ
EDVSWTDFFDPISHPMGQGHQTESKGHSSGNQDSGVTTTSGPARRPQIPEWLIILASLLA
LALILAVCIAVNSRRRCGQKKKLVINSGNGTVEDRKPSELNGEASKSQEMVHLVNKEPTE
TPDQFMTADETRNLQSVDMKIGV

Region:1-503
Length:503aa
Label:Full sequence
Reset:click