Input sequence

Protein name RNA polymerase sigma-54 factor
Organism EColi Length 477
Disorder content 13.8% ProS content 5.9%
IDEAL NA UniProt P24255

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP SEG:LCR 0 477 1-44 45-110 111-477 1-44 111-477 45-110 45-52 81-94 105-110 423-474 397-465 117-230 317-474 112-303 3-51 106-304 316-475 418-476 25-42 159-176 349-360 2o8kA(11-62) 5e-09 50.0% 2ahqA(2-66) 5e-15 37.68% 2k9mA(2-105) 4e-08 20.18% PF04552(2-159) 8e-51 66.46% PF04963(7-194) 2e-43 53.09% PF00309 6.5e-20 76.7% PF04963 1e-120 411.6% PF04552 1.1e-107 368.4% 1m0tA1(1-59) 2e-13 18.03%

Sequence

MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQIDTHEEIDTRE
TQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSGDYIDDELPVYQGETTQTL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGDEEIDIDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARLIISDHLDLLANHDFRTLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN
QHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV

Region:1-477
Length:477aa
Label:Full sequence
Reset:click