Input sequence

Protein name Probable cyclic di-GMP phosphodiesterase PdeA
Organism EColi Length 729
Disorder content 1.0% ProS content 1.0%
IDEAL NA UniProt P23842

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP SEG:LCR TMHMM:TMhelix 0 729 1-5 6-104 105-106 107-729 6-104 107-729 1-5 105-106 1-5 105-106 491-726 491-729 495-724 329-415 15-316 322-448 487-724 492-726 331-420 217-230 15-37 42-64 82-104 125-147 162-184 215-234 238-255 289-311 4rniA(4-243) 5e-29 32.92% 4fojA(11-249) 3e-74 20.5% PF00563(4-236) 7e-41 39.91% PF00990(4-98) 0.0007 27.37% PF05231 1.3e-66 231.9% PF00990 0.00077 -42.7% PF00563 2.7e-93 320.5% 2basA1(1-233) 7e-44 23.97% 1w25A3(1-98) 2e-05 15.31%

Sequence

MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG
WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY
VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN
MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA
GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS
FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL
EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI
LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM
VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP
LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY
HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII
KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL
IGRPQPLAD

Region:1-729
Length:729aa
Label:Full sequence
Reset:click