Input sequence

Protein name Tumor necrosis factor receptor superfamily member 1A
Organism Rattus norvegicus Length 461
Disorder content 38.6% ProS content 16.1%
IDEAL NA UniProt P22934

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 461 1-4 5-27 28-48 49-190 191-210 211-233 234-358 359-453 454-461 5-27 49-190 211-233 359-453 1-4 28-48 191-210 234-358 454-461 1-3 42-48 191-199 207-210 234-252 263-271 276-283 308-311 356-358 454-461 42-201 363-448 363-448 44-166 378-417 44-81 84-125 127-166 364-448 355-458 42-100 145-184 101-144 42-100 101-144 145-201 363-449 2-19 213-234 5-27 211-233 1extA(1-160) 1e-69 68.12% 1ichA(1-86) 1e-32 74.42% 1ichA(1-86) 5e-27 74.42% 2uwiA(1-123) 2e-15 27.2% PF00531(14-52) 7e-05 50.0% PF00020 6.3e-11 46.9% PF00020 2.6e-16 64.8% PF00020 1.4e-10 45.7% PF00531 2.2e-22 85.0% 1ddfA(5-108) 1e-20 18.1% 1extA1(1-59) 2e-19 71.19% 1ft4B3(1-40) 2e-14 67.5% 1extA2(1-44) 0.0002 65.91% g.24.1 4.8e-15 48.0% g.24.1 2.5e-17 61.3% g.24.1 1e-11 43.2% a.77.1 9.5e-23 80.1%

Sequence

MGLPIVPGLLLSLVLLALLMGIHPSGVTGLVPSLGDREKRDNLCPQGKYAHPKNNSICCT
KCHKGTYLVSDCPSPGQETVCEVCDKGTFTASQNHVRQCLSCKTCRKEMFQVEISPCKAD
MDTVCGCKKNQFQRYLSETHFQCVDCSPCFNGTVTIPCKEKQNTVCNCHAGFFLSGNECT
PCSHCKKNQECMKLCLPPVANVTNPQDSGTAVLLPLVIFLGLCLLFFICISLLCRYPQWR
PRVYSIICRDSAPVKEVEGEGIVTKPLTPASIPAFSPNPGFNPTLGFSTTPRFSHPVSST
PISPVFGPSNWHNFVPPVREVVPTQGADPLLYGSLNPVPIPAPVRKWEDVVAAQPQRLDT
ADPAMLYAVVDGVPPTRWKEFMRLLGLSEHEIERLELQNGRCLREAHYSMLEAWRRRTPR
HEATLDVVGRVLCDMNLRGCLENIRETLESPAHSSTTHLPR

Region:1-461
Length:461aa
Label:Full sequence
Reset:click