Input sequence

Protein name Glutamate receptor ionotropic, kainate 1
Organism Rattus norvegicus Length 949
Disorder content 10.2% ProS content 7.4%
IDEAL NA UniProt P22756

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 949 1-26 27-138 139-142 143-560 561-564 565-818 819-828 829-888 889-949 27-138 143-560 565-818 829-888 1-26 819-828 889-949 1-26 819-822 896-906 911-918 929-949 36-522 679-843 476-579 37-860 575-845 458-521 57-379 53-397 575-856 447-561 678-818 56-414 588-680 26-422 448-820 44-55 111-121 256-269 912-933 578-597 654-676 837-859 4uqqA(3-461) 0.0 71.52% 4uqqA(540-693) 2e-75 83.64% 4tllB(408-506) 1e-17 40.38% 3kg2A(3-779) 3e-97 30.65% PF00060(1-265) 5e-71 50.55% PF10613(1-64) 9e-21 65.62% PF01094(4-308) 8e-13 24.32% PF01094 3.3e-70 243.8% PF00060 5.7e-163 552.0% 1ftjA(1-116) 6e-35 57.76% 1ftjA(113-256) 2e-32 45.14% 1peaA(22-357) 9e-26 10.99% 1bl8A(8-97) 3e-09 19.79% c.93.1 3.4e-64 224.3% c.94.1 4.4e-58 203.9%

Sequence

MERSTVLIQPGLWTRDTSWTLLYFLCYILPQTSPQVLRIGGIFETVENEPVNVEELAFKF
AVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ
SICNALEVPHIQTRWKHPSVDSRDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS
TGLIRLQELIKAPSRYNIKIKIRQLPPANKDAKPLLKEMKKSKEFYVIFDCSHETAAEIL
KQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRKLNIDNPHVSSIIEKWSME
RLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPCALGPRF
MNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGI
WNSNSGLNMTDGNRDRSNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEAYCL
DLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREK
VIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT
PYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTL
IIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKM
WAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG
VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFI
VLAAGLVLSVFVAIGEFLYKSRKNNDVEQKGKSSRLRFYFRNKVRFHGSKKESLGVEKCL
SFNAIMEELGISLKNQKKLKKKSRTKGKSSFTSILTCHQRRTQRKETVA

Region:1-949
Length:949aa
Label:Full sequence
Reset:click