Input sequence

Protein name Voltage-dependent L-type calcium channel subunit alpha-1C
Organism Rattus norvegicus Length 2169
Disorder content 34.0% ProS content 23.2%
IDEAL NA UniProt P22002

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2169 1-126 127-247 248-251 252-257 258-480 481-535 536-806 807-890 891-1336 1337-1341 1342-1347 1348-1664 1665-2061 2062-2101 2102-2160 2161-2165 2166-2169 127-247 258-480 536-806 891-1336 1348-1664 2062-2101 2161-2165 1-126 252-257 481-535 807-890 1342-1347 1665-2061 2102-2160 2166-2169 1-18 25-88 99-103 111-126 481-498 513-535 807-814 824-836 842-857 864-873 883-890 1665-1669 1676-1705 1726-1738 1791-1800 1819-1823 1835-1887 1895-1918 1926-1935 1944-1974 1985-2008 2018-2032 2041-2061 2102-2160 2166-2169 1589-1663 449-477 1588-1663 1506-1615 442-484 192-434 1282-1504 596-781 966-1158 1639-1666 2023-2145 191-434 588-782 965-1194 1282-1504 1579-1728 1244-1372 551-660 150-272 141-443 533-807 930-1203 1237-1508 1505-1665 56-69 78-89 534-548 665-698 797-807 827-839 875-882 935-947 1004-1013 1023-1037 1171-1190 1793-1803 1970-1994 779-806 155-177 192-214 223-242 298-320 380-402 412-434 554-573 593-615 681-703 753-775 926-948 963-985 998-1020 1058-1080 1174-1196 1241-1263 1275-1297 1388-1407 1482-1504 3g43E(2-68) 6e-28 88.0% 4deyB(1-29) 7e-10 100.0% 3g43E(1-68) 1e-20 86.84% 2kavA(1-106) 4e-17 24.32% 4dexB(1-43) 4e-11 46.51% PF00520(2-198) 1e-32 35.08% PF00520(1-198) 5e-26 29.87% PF00520(9-197) 2e-16 38.78% PF00520(2-172) 6e-14 31.31% PF08763(1-28) 2e-09 92.86% PF06670(223-332) 0.0005 30.08% PF00520 4.1e-74 256.8% PF00520 1.5e-54 191.8% PF00520 3.5e-64 223.8% PF00520 2.2e-74 257.7% 2ffjA1(27-177) 1e-23 17.2% 1orsC(2-115) 6e-17 13.53% 1orsC(3-108) 2e-11 18.02% 1orsC(2-109) 3e-09 15.45% f.14.1 3e-36 125.9% f.14.1 1.2e-29 102.9% f.14.1 2.6e-28 98.3% f.14.1 3.4e-35 122.3% a.39.1 0.00057 13.3%

Sequence

MIRAFAQPSTPPYQPLSSCLSEDTERKFKGKVVHEAQLNCFYISPGGSNYGSPRPAHANM
NANAAAGLAPEHIPTPGAALSWLAAIDAARQAKLMGSAGNATISTVSSTQRKRQQYGKPK
KQGGTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPED
DSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSA
ILEQATKADGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLH
IALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGIIDVPAEEDPSPCALETGHGRQCQNGT
VCKPGWDGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVI
FGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPE
NEDEGMDEDKPRNMSMPTSETESVNTENVAGGDIEGENCGARLAHRISKSKFSRYWRRWN
RFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYNQPHWLTEVQDTANKALLALFTAE
MLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKIMSPLGISCWRCVRLLRIFKI
TRYWNSLSNLVASLLNSLRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFD
NFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFISPNYILLNLFLA
IAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKKQEVMEKPAVEESKEEKIELKSIT
ADGESPPTTKINMDDLQPSENEDKSPHSNPDTAGEEDEEEPEMPVGPRPRPLSELHLKEK
AVPMPEASAFFIFSPNNRFRLQCHRIVNDTIFTNLILFFILLSSISLAAEDPVQHTSFRN
HILFYFDIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSA
INVVKILRVLRVLRPLRINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLF
KGKLYTCSDSSKQTEAESKGNYITYKTGEVDHPIIQPRSWENSKFDFDNVLAAMMALFTV
STFEGWPELLYRSIDSHTEDKGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQE
QGEQEYKNCELDKNQRQCVEYALKARPLPRYIPKNQHQYKVWYVVNSTYFEYLMFVLILL
NTICLAMQHYGQSCLFKIAMNILNMLFTGLFTVEMILKLIAFKPKHYFCDAWNTFDALIV
VGSIVDIAITEVHPAEHTQCSPSMSAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLW
TFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALNDTTEINRNNNFQTFPQAVLLLFR
CATGEAWQDIMLACMPGKKCAPESEPSNSTEGETPCGSSFAVFYFISFYMLCAFLIINLF
VAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFG
KLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRAIIKK
IWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRNALSL
QAGLRTLHDIGPEIRRAISGDLTAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVSYYQ
SDSRSNFPQTFATQRPLHINKTGNNQADTESPSHEKLVDSTFTPSSYSSTGSNANINNAN
NTALGRFPHPAGYSSTVSTVEGHGPPLSPAVRVQEAAWKLSSKRCHSRESQGATVSQDMF
PDETRSSVRLSEEVEYCSEPSLLSTDILSYQDDENRQLTCLEEDKREIQPCPKRSFLRSA
SLGRRASFHLECLKRQKDQGGDISQKTALPLHLVHHQALAVAGLSPLLQRSHSPSTFPRP
RPTPPVTPGSRGRPLQPIPTLRLEGAESSEKLNSSFPSIHCSSWSEETTACSGGSSMARR
ARPVSLTVPSQAGAPGRQFHGSASSLVEAVLISEGLGQFAQDPKFIEVTTQELADACDMT
IEEMENAADNILSGGAQQSPNGTLLPFVNCRDPGQDRAVVPEDESCVYALGRGRSEEALP
DSRSYVSNL

Region:1-2169
Length:2169aa
Label:Full sequence
Reset:click