Input sequence

Protein name Antigen peptide transporter 1
Organism Mus musculus Length 724
Disorder content 6.6% ProS content 4.4%
IDEAL NA UniProt P21958

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 724 1-4 5-59 60-65 66-88 89-115 116-138 139-144 145-311 312-312 313-720 721-724 5-59 66-88 116-138 145-311 313-720 1-4 60-65 89-115 139-144 312-312 721-724 1-4 60-65 89-96 103-115 312-312 468-718 235-718 236-429 521-647 163-434 507-694 148-462 478-708 368-575 151-462 468-718 2-20 49-65 69-88 163-175 303-321 5-27 37-59 66-88 116-138 163-185 205-227 289-311 2ixeA(1-251) 5e-128 91.63% 3g5uA(694-1180) 2e-136 32.31% PF00664(76-269) 7e-18 36.08% PF00005(1-123) 5e-13 36.5% PF00664 3.8e-73 253.6% PF00005 6.8e-63 219.5% 2hydA2(1-322) 1e-42 19.88% 1b0uA(2-239) 8e-37 22.76% 1qhdA1(10-211) 5e-22 8.17% f.37.1 1.9e-71 216.7% c.37.1 1.3e-64 215.2%

Sequence

MAAHVWLAAALLLLVDWLLLRPMLPGIFSLLVPEVPLLRVWVVGLSRWAILGLGVRGVLG
VTAGAHGWLAALQPLVAALSLALPGLALFRELAAWGTLREGDSAGLLYWNSRPDAFAISY
VAALPAAALWHKLGSLWAPSGNRDAGDMLCRMLGFLGPKKRRLYLVLVLLILSCLGEMAI
PFFTGRITDWILQDKTVPSFTRNIWLMSILTIASTALEFASDGIYNITMGHMHGRVHREV
FRAVLRQETGFFLKNPAGSITSRVTEDTANVCESISGTLSLLLWYLGRALCLLVFMFWGS
PYLTLVTLINLPLLFLLPKKLGKVHQSLAVKVQESLAKSTQVALEALSAMPTVRSFANEE
GEAQKFRQKLEEMKTLNKKEALAYVAEVWTTSVSGMLLKVGILYLGGQLVIRGAVSSGNL
VSFVLYQLQFTQAVQVLLSLYPSMQKAVGSSEKIFEYLDRTPCSPLSGSLAPSNMKGLVE
FQDVSFAYPNQPKVQVLQGLTFTLHPGTVTALVGPNGSGKSTVAALLQNLYQPTGGQLLL
DGQCLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLNRTPTMEEITAVAVESGAHDF
ISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPLLLILDDATSALDAGNQLRVQRL
LYESPKRASRTVLLITQQLSLAEQAHHILFLREGSVGEQGTHLQLMKRGGCYRAMVEALA
APAD

Region:1-724
Length:724aa
Label:Full sequence
Reset:click