Input sequence

Protein name Collagen alpha-1(XI) chain
Organism Rattus norvegicus Length 1804
Disorder content 75.6% ProS content 73.2%
IDEAL NA UniProt P20909

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1804 1-40 41-249 250-1573 1574-1804 41-249 1574-1804 1-40 250-1573 1-40 257-350 355-499 525-1545 1554-1573 1594-1803 71-228 778-859 1594-1803 39-240 771-859 1591-1802 104-227 440-499 522-580 581-640 641-700 701-760 761-820 821-880 881-940 941-1000 1001-1060 1064-1123 1124-1183 1184-1243 1244-1303 1304-1363 1364-1423 1424-1483 1484-1543 1591-1802 1545-1749 38-228 784-862 55-243 1589-1643 256-276 280-298 378-393 440-494 509-526 533-596 611-632 638-677 680-734 746-761 872-944 952-983 1031-1059 1066-1100 1103-1121 1139-1160 1183-1232 1235-1368 1373-1392 1417-1448 1453-1463 1478-1520 1528-1538 4ae2A(1-212) 3e-40 41.86% 2uurA(39-198) 8e-09 25.45% 2pneA(2-81) 8e-07 41.46% 4ae2A(1-212) 5e-42 39.53% 2uurA(12-210) 7e-24 22.97% 2pneA(1-81) 2e-10 37.08% PF01410(1-209) 1e-55 51.61% PF02210 3.2e-18 71.1% PF01391 9.8e-06 25.9% PF01391 1e-05 25.7% PF01391 1.2e-15 62.6% PF01391 9.6e-14 56.3% PF01391 3.6e-10 44.4% PF01391 1.1e-11 49.5% PF01391 1.9e-12 52.0% PF01391 1.8e-14 58.7% PF01391 2.4e-12 51.6% PF01391 4.7e-13 54.0% PF01391 1.7e-12 52.2% PF01391 2.7e-07 34.8% PF01391 3.3e-09 41.2% PF01391 1.3e-12 52.5% PF01391 3.9e-09 41.0% PF01391 3.5e-10 44.4% PF01391 2.4e-12 51.6% PF01391 6e-06 29.9% PF01410 2.8e-137 466.6% 1j83A(2-180) 4e-41 14.69% 1z78A1(4-194) 3e-25 19.4% 1af0A1(145-223) 6e-06 8.86% b.29.1 3.3e-33 80.5% d.171.1 0.00012 14.2%

Sequence

MEPWSRWKTKRWIWDLTISTLVLTFLFQAREVRGAAPVDILKALDFHNSPVGISKTTGFC
TSRKNSKDPDIAYRVTEEAQISAPTKQLFPGGIFPQDFSILFTIKPKKGTQAFLLSLYNE
HGIQQLGVEVGRSPVFLFEDHTGKPTPENYPLFSTVNIADGKWHRVAISVEKKTVTMIVD
CKKKITKPLDRSERSIVDTNGIMVFGTRILETDVFQGDIQQFLITGDPKAAYDYCDHYSP
DCDLTSKAAQAQEPHIDEYAPEDIIEYDYEYGETDYKEAESVTEMPTVTEETVAQTEANI
VDDFQDYNYGTMETYQTESPRRVSGSNEPNPVEEGFTEEYLTGEDYDVQRNISEDILYGN
KGIDGRDSDLLVDGDLGEYDFYEYKEYEERTTTSPNEEFGPGVPAETDFTETSINGHGAY
GEKGQKGEPAVVEPGMLVEGPPGPAGPAGLMGPPGLQGPSGLPGDPGDRGPPGRPGLPGA
DGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGP
VGGPGSAGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGF
DGLPGLPGDKGHRGERGPQGPPGLPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGP
PGQPGIGGIDGPQGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGL
AGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE
DGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGL
PGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGP
KGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPGHPGQRGETGFQGKTGP
PGPGGVVGPQGPTGETGPIGERGHPGTPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGP
AGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPIGSPGERGSAGTAGPIGLPGRPGPQGP
PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD
KGENGPPGPPGLQGPVGAPGIAGGDGEAGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGL
PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKGEPGEAGN
PGPPGEAGSGGPKGERGEKGEAGPPGAAGPPGIKGPPGDDGPKGNPGPVGFPGDPGPPGE
PGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGASGSEGRQGEKGAKGE
AGAEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPGL
KGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPIGPPGP
PGLPGPAGPKGNKGSSGPTGQKGDSGMPGPPGPPGPPGEVIQPLPILSPKKTRRHTESIQ
ADAGDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEY
WIDPNQGCSGDSFKVYCNFTAGGETCIYPDKKSEGVRLSSWPKEKPGSWYSEFKRGKLLS
YLDVEGNSINMVQMTFLKLLTASARQNFTYNCHQSTAWYDVLSGSYDKALRFLGSNDEEM
SYENNPHIKALYDGCASRKGYEKTVIEINTPKIDQVPIIDVMINDFGDQNQKFGFEVGPA
CFLG

Region:1-1804
Length:1804aa
Label:Full sequence
Reset:click