Input sequence

Protein name Collagen alpha-1(V) chain
Organism Homo sapiens Length 1838
Disorder content 76.2% ProS content 71.7%
IDEAL NA UniProt P20908

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1838 1-34 35-49 50-55 56-248 249-1608 1609-1838 35-49 56-248 1609-1838 1-34 50-55 249-1608 1-34 50-55 249-322 334-360 376-423 439-462 468-530 559-1577 1587-1608 1628-1837 73-208 1628-1837 66-242 1625-1836 106-229 469-528 554-612 613-672 673-732 733-792 793-852 853-912 913-972 985-1044 1045-1104 1105-1164 1165-1224 1225-1284 1285-1344 1345-1404 1405-1464 1465-1524 1525-1584 1625-1836 1598-1783 41-231 57-245 1623-1682 9-37 259-284 302-323 416-428 461-490 493-523 545-558 565-619 643-698 712-757 760-793 826-877 895-925 949-979 984-1033 1077-1132 1134-1165 1174-1193 1213-1243 1249-1421 1450-1480 1485-1495 1522-1570 4ae2A(1-212) 2e-42 42.66% 2uurA(39-175) 3e-09 28.87% 4ae2A(1-212) 3e-44 41.86% 2uurA(32-210) 3e-23 25.82% PF01410(1-209) 9e-61 55.09% PF02210 6.3e-15 60.2% PF01391 1.3e-05 23.8% PF01391 7.8e-06 27.7% PF01391 2.1e-15 61.8% PF01391 4.2e-15 60.8% PF01391 1e-09 42.8% PF01391 3.7e-08 37.7% PF01391 5e-10 43.9% PF01391 7.6e-15 59.9% PF01391 3.4e-13 54.4% PF01391 2e-13 55.2% PF01391 1.4e-13 55.7% PF01391 1e-11 49.6% PF01391 7.5e-11 46.7% PF01391 1.6e-11 48.9% PF01391 6.6e-10 43.5% PF01391 8.8e-11 46.4% PF01391 1.3e-13 55.9% PF01391 2.3e-05 19.0% PF01410 1.5e-144 490.8% 1j83A(9-180) 5e-45 16.15% 1z78A1(5-195) 6e-23 17.41% b.29.1 2e-33 81.0% d.171.1 0.0005 12.1%

Sequence

MDVHTRWKARSALRPGAPLLPPLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITKTTG
FCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIY
NEQGIQQIGLELGRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLI
LDCKKKTTKFLDRSDHPMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHY
SPDCDTAVPDTPQSQDPNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAA
KETTEVPEELTPTPTEAAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEG
EENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPY
YDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP
GPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS
AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPP
GPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDD
GERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPP
GQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPP
GPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGED
GPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGR
GTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFP
GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPP
GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPP
GPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPV
GLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEP
GPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPS
GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAA
GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPT
GEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLR
GIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK
GDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHP
GPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKL
EIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTC
VFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQ
NVTYHCYQSVAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVL
EIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG

Region:1-1838
Length:1838aa
Label:Full sequence
Reset:click