Input sequence

Protein name Collagen alpha-1(VI) chain
Organism Gallus gallus Length 1019
Disorder content 30.4% ProS content 30.4%
IDEAL NA UniProt P20785

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1019 1-18 19-50 51-54 55-142 143-148 149-258 259-311 312-341 342-501 502-508 509-587 588-1019 19-50 55-142 149-258 312-341 502-508 588-1019 1-18 259-311 342-501 509-587 1-18 259-311 342-501 509-587 613-1003 824-1000 612-826 35-249 506-567 326-423 613-729 37-209 824-980 37-230 255-314 330-389 393-452 453-512 530-590 613-792 824-1004 607-818 30-247 821-1014 273-425 509-562 31-247 605-812 815-1016 8-17 251-270 299-324 354-381 426-453 456-483 489-504 570-589 4cn9A(10-375) 7e-10 22.06% 1rrkA(3-184) 2e-20 20.21% 1rrkA(2-203) 5e-20 19.09% 1lfaA(2-183) 2e-09 14.75% 2pneA(2-61) 1e-07 37.1% 2pneA(5-76) 3e-07 28.28% PF00092(1-108) 2e-05 30.51% PF00092(1-153) 4e-05 27.75% PF00092(1-150) 7e-05 23.12% PF00092 1.9e-22 85.2% PF01391 2.6e-11 48.2% PF01391 1.3e-11 49.2% PF01391 5.5e-12 50.4% PF01391 1.8e-12 52.0% PF01391 6e-05 11.2% PF00092 2.5e-34 124.6% PF00092 2.6e-36 131.2% 1auqA(11-208) 8e-20 17.35% 1auqA(10-207) 2e-17 11.93% 1jeqB2(1-214) 9e-18 10.67% 1af0A1(2-119) 5e-05 11.76% 1af0A1(137-190) 0.0002 11.11% c.62.1 5.6e-40 132.6% c.62.1 4.5e-32 108.2% c.62.1 2.4e-34 115.9%

Sequence

MGLHDSFLALLLLLGGAWAQQAEINARVLRAQDCPVDLFFVLDTSESVALRVKPFGDLVA
QVKDFTNRFIDKLTERYFRCDRFLAWNAGALHYSDSVVIIKDLTAMPSGRAELKNSVSAI
NYIGKGTHTDCAIKQGIERLLLGGSHLKENKYLIVVTDGHPLEGYKEPCGGLDDAANEAK
HLGIKVFSVAISPHHLDQRLNIIATDHAYRRNFTATSLKPTRDLDVEETINNIIEMIKDN
MEQSCCSFECHPPRGPPGPPGDPGHEGERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKG
DKGSRGEKGSRGAKGAKGEKGKRGIDGIDGMKGEAGYPGLPGCKGSPGFDGTQGPPGPKG
DPGAYGPKGGKGEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPG
ERGSNGERGPPGSPGDRGPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDG
PRGNEGPKGSPGAPGLPGDPGLMGERGEDGPPGNGTIGFPGAPGQQGDRGDPGINGTKGY
VGPKGDEGEAGDPGNDNPTAGPSGIKGAKGHRGPEGRPGPPGPVGPPGPDECEILDIIMK
MCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGESRVGV
VQYSHNNTQELVAMGDANIDNIGALKQAVKNLKWIAGGTHTGEALQFSKENLLRRFTSNN
NVAIVITDGRSDTLRDRTPLTSLCEVTPVVSLGIGDIFRNNPNPDQLNDIACLGMPRRQG
LSIQRDNYAELLDDSFLQNITSYVCREKKCPDYTCPITFANPADIMLLVDSSTSVGSKNF
DTTKNFVKRLAERFLEASKPAEDSVRVSVVQYSGRNQQKVEVPFQRNYTVIAKAVDNMEF
MNEATDVNAALQYIMGLYQRSSRSGAKKKVLVFSDGNSQGITARAIERTVQEVQQAGIEV
YVLAVGSQVNEPNVRVLVTGKSTNYDVAYGERHLFRVPDYTSLLRGVFYQTVSRKIAVD

Region:1-1019
Length:1019aa
Label:Full sequence
Reset:click