Input sequence

Protein name Rano class II histocompatibility antigen, B alpha chain
Organism Rattus norvegicus Length 256
Disorder content 10.9% ProS content 10.9%
IDEAL NA UniProt P20037

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 256 1-20 21-210 211-214 215-248 249-256 21-210 215-248 1-20 249-256 1-20 249-256 27-208 26-207 31-109 122-200 30-111 120-202 31-108 121-212 27-109 107-234 224-241 219-241 1iakA(1-182) 4e-87 80.77% 1uvqA(1-182) 3e-49 70.88% PF00993(2-79) 2e-28 68.35% PF07654(3-81) 4e-06 34.18% PF00993 5.2e-54 190.0% PF07654 2.6e-39 141.2% 1a6aA2(1-77) 8e-20 52.56% 1d2oA1(2-89) 3e-17 6.52% d.19.1 6.5e-34 113.7% b.1.1 5.1e-27 83.1%

Sequence

MPLSRALILGVLALTTMLSPCGGQDDIEADHVGSYGITVYQYHESKGQYTHEFDGDERFY
VDLDKKETIWRIPEFGQLISFDPQGALRNIAIIKHNLEILMKRSNSTPAVNEVPEATVFS
KSPVLLGQPNTLICFVDNIFPPVINITWLRNSKPLTEGVYETSFLINSDYSFHKMAYLTF
IPSNDDIYDCKVEHWSLDEPVLRHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSVAPSRHPGPL

Region:1-256
Length:256aa
Label:Full sequence
Reset:click