Input sequence

Protein name 5-hydroxytryptamine receptor 1A
Organism Rattus norvegicus Length 422
Disorder content 37.0% ProS content 11.1%
IDEAL NA UniProt P19327

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 422 1-37 38-227 228-343 344-419 420-422 38-227 344-419 1-37 228-343 420-422 1-37 337-343 420-422 339-415 121-152 61-351 332-415 54-215 321-400 53-400 4-175 354-421 10-422 217-227 38-60 73-95 110-132 153-175 197-219 344-366 381-403 2rh1A(367-440) 3e-13 46.75% 1hllA(1-32) 7e-08 75.0% 4iaqA(37-307) 5e-30 20.52% 2vt4A(193-273) 3e-17 33.33% PF00001(1-166) 4e-37 47.59% PF00001(173-253) 1e-18 51.22% PF00001 2.3e-111 380.6% 1f88A(9-175) 1e-17 18.6% 1f88A(257-323) 1e-06 27.94% f.13.1 6.9e-79 263.0%

Sequence

MDVFSFGQGNNTTASQEPFGTGGNVTSISDVTFSYQVITSLLLGTLIFCAVLGNACVVAA
IALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCC
TSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLISIPPMLGWRTPED
RSDPDACTISKDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVRKVEKKGAGT
SLGTSSAPPPKKSLNGQPGSGDWRRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGN
SKEHLPLPSESGSNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLP
FFIVALVLPFCESSCHMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC
RR

Region:1-422
Length:422aa
Label:Full sequence
Reset:click