Input sequence

Protein name Integrin alpha-1
Organism Rattus norvegicus Length 1180
Disorder content 4.2% ProS content 1.4%
IDEAL NA UniProt P18614

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1180 1-6 7-423 424-428 429-546 547-562 563-690 691-695 696-743 744-747 748-869 870-874 875-926 927-931 932-1042 1043-1050 1051-1170 1171-1180 7-423 429-546 563-690 696-743 748-869 875-926 932-1042 1051-1170 1-6 547-562 744-747 927-931 1043-1050 1171-1180 557-562 744-747 1171-1176 29-1005 1136-1180 29-1104 1136-1180 663-1051 172-355 489-528 570-605 663-1073 334-664 29-155 167-365 666-808 943-1108 811-943 29-664 665-809 810-944 945-1146 1109-1126 1147-1164 7-29 1143-1165 4nehA(1-952) 6e-98 29.15% 2l8sA(2-46) 8e-08 100.0% 4nehA(1-1047) 5e-109 25.61% 2l8sA(2-46) 3e-05 100.0% PF08441(1-401) 8e-44 31.62% PF00092 2.4e-54 191.1% PF01839 1.2e-05 29.3% PF01839 1.6e-05 29.0% PF08441 5.2e-143 485.7% 1jv2A4(111-438) 2e-42 24.29% 1jv2A4(1-135) 6e-16 25.0% 1aoxA(2-200) 4e-37 50.75% 1jv2A1(2-159) 1e-29 20.62% 1jv2A3(1-156) 5e-21 18.34% 1jv2A2(2-138) 2e-19 16.08% b.69.8 1.1e-97 316.5% b.1.15 1.7e-23 80.0% b.1.15 3.1e-24 90.2% b.1.15 1.5e-32 112.0%

Sequence

MVPRRPASLEVTVACIWLLTVILGFCVSFNVDVKNSMSFSGPVEDMFGYTVQQYENEEGK
WVLIGSPLVGQPKARTGDVYKCPVGRERAMPCVKLDLPVNTSIPNVTEIKENMTFGSTLV
TNPNGGFLACGPLYAYRCGHLHYTTGICSDVSPTFQVVNSFAPVQECSTQLDIVIVLDGS
NSIYPWESVIAFLNDLLKRMDIGPKQTQVGIVQYGENVTHEFNLNKYSSTEEVLVAANKI
GRQGGLQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNYRLKQVIQDCEDE
NIQRFSIAILGHYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSDELALVTIVKALGERIF
ALEATADQSAASFEMEMSQTGFSAHYSQDWVMLGAVGAYDWNGTVVMQKANQMVIPHNTT
FQTEPAKMNEPLASYLGYTVNSATIPGDVLYIAGQPRYNHTGQVVIYKMEDGNINILQTL
GGEQIGSYFGSVLTTIDIDKDSYTDLLLVGAPMYMGTEKEEQGKVYVYAVNQTRFEYQMS
LEPIRQTCCSSLKDNSCTKENKNEPCGARFGTAIAAVKDLNVDGFNDVVIGAPLEDDHAG
AVYIYHGSGKTIREAYAQRIPSGGDGKTLKFFGQSIHGEMDLNGDGLTDVTIGGLGGAAL
FWARDVAVVKVTMNFEPNKVNIQKKNCRVEGKETVCINATMCFHVKLKSKEDSIYEADLQ
YRVTLDSLRQISRSFFSGTQERKIQRNITVRESECIRHSFYMLDKHDFQDSVRVTLDFNL
TDPENGPVLDDALPNSVHEHIPFAKDCGNKERCISDLTLNVSTTEKSLLIVKSQHDKFNV
SLTVKNKGDSAYNTRTVVQHSPNLIFSGIEEIQKDSCESNQNITCRVGYPFLRAGETVTF
KIIFQFNTSHLSENAIIHLSATSDSEEPLESLNDNEVNISIPVKYEVGLQFYSSASEHHI
SVAANETIPEFINSTEDIGNEINVFYTIRKRGHFPMPELQLSISFPNLTADGYPVLYPIG
WSSSDNVNCRPRSLEDPFGINSGKKMTISKSEVLKRGTIQDCSSTCGVATITCSLLPSDL
SQVNVSLLLWKPTFIRAHFSSLNLTLRGELKSENSSLTLSSSNRKRELAIQISKDGLPGR
VPLWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKKMEK

Region:1-1180
Length:1180aa
Label:Full sequence
Reset:click