Input sequence

Protein name Cold shock domain-containing protein E1
Organism Rattus norvegicus Length 798
Disorder content 9.5% ProS content 6.5%
IDEAL NA UniProt P18395

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP 0 798 1-22 23-110 111-119 120-436 437-453 454-583 584-588 589-593 594-605 606-613 614-741 742-747 748-762 763-767 768-798 23-110 120-436 454-583 594-605 614-741 768-798 1-22 111-119 437-453 589-593 606-613 748-762 1-22 116-119 437-442 449-453 748-762 172-259 345-424 15-90 508-582 673-744 172-259 504-582 345-424 14-90 671-744 25-90 185-248 348-413 518-582 673-738 15-92 180-248 338-413 669-744 514-577 23-90 183-248 346-413 516-582 671-738 2ytxA(5-92) 1e-42 96.59% 1x65A(5-84) 1e-38 95.0% 1wfqA(8-83) 6e-38 98.68% 2ytyA(8-82) 4e-37 100.0% 2ytvA(8-78) 4e-33 94.44% 2ytxA(5-92) 2e-30 96.59% 2ytyA(4-82) 3e-29 94.94% 1x65A(5-84) 1e-28 95.0% 1wfqA(7-83) 3e-27 97.4% 2ytvA(6-78) 2e-24 91.89% PF00313 5.9e-21 80.2% PF00313 4.1e-24 90.7% PF00313 2.1e-06 31.9% PF00313 2.9e-20 77.9% PF00313 4e-20 77.4% 1wfqA(8-85) 5e-14 96.15% 1wfqA(13-81) 1e-07 30.43% 1wfqA(6-83) 2e-06 31.65% 1wfqA(14-88) 8e-06 28.57% 1wfqA(14-77) 8e-06 28.12% b.40.4 5.4e-09 30.8% b.40.4 1.6e-12 42.4% b.40.4 6.5e-08 27.2% b.40.4 9.4e-11 36.6% b.40.4 1.1e-07 26.4%

Sequence

MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL
QDLKVGDDVEFEVSSDRRTGKPIAIKLVKIKPEIHPEERMNGQVVCAVPHNLESKSPAAP
GQSPTGSVCYERNGEVFYLTYTSEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK
KKQARYQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE
VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG
DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF
GFIKCVDRDARMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF
HSHSDHRFLGTVEKEATFSNPKTTSPNKGKDKEAEDGIIAYDDCGVKLTIAFQAKDVEGS
TSPQIGDKVEFSISDKQRPGQQIATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK
EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEANPTIYSGK
VIRPLRGVDPTQIEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG
QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS
VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD
NSMGFGAERKIRQAGVID

Region:1-798
Length:798aa
Label:Full sequence
Reset:click