Input sequence

Protein name CD44 antigen
Organism Homo sapiens Length 742
Disorder content 80.3% ProS content 38.1%
IDEAL NA UniProt P16070

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 742 1-13 14-125 126-131 132-649 650-672 673-683 684-688 689-742 14-125 650-672 684-688 1-13 132-649 673-683 689-742 1-13 132-156 191-224 242-250 264-281 322-334 357-363 401-413 426-429 446-463 471-476 482-498 512-516 535-547 573-580 590-611 617-625 633-637 646-649 673-683 707-714 722-742 20-169 20-169 31-119 31-119 20-169 20-169 179-192 221-236 279-288 361-380 386-399 420-435 502-516 612-634 651-665 650-672 4pz3A(1-150) 1e-85 100.0% 4pz3A(1-150) 5e-60 100.0% PF00193(1-92) 4e-09 36.96% PF00193 3.6e-45 160.7% 1uuhA(1-150) 9e-54 98.67% d.169.1 1.6e-54 186.0%

Sequence

MDKFWWHAAWGLCLVPLSLAQIDLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTL
PTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCFN
ASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSS
GSSSERSSTSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQE
TWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWEPNEENEDERDRHLSFSGSGIDDD
EDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWN
PEAHPPLIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDS
HSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSIT
LQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDV
TGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNR
SLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLAL
ALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSET
PDQFMTADETRNLQNVDMKIGV

Region:1-742
Length:742aa
Label:Full sequence
Reset:click