Input sequence

Protein name SLA class II histocompatibility antigen, DQ haplotype C beta chain
Organism Sus scrofa Length 261
Disorder content 14.2% ProS content 12.6%
IDEAL NA UniProt P15982

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 261 1-30 31-136 137-142 143-254 255-261 31-136 143-254 1-30 255-261 5-30 255-261 35-224 39-225 45-119 141-215 45-119 135-217 9-154 130-220 6-125 122-243 234-251 232-251 1jk8B(1-190) 2e-88 78.42% 1bx2B(5-191) 2e-48 65.24% PF00969(1-75) 8e-28 69.33% PF07654(7-81) 2e-08 38.67% PF00969 5.8e-40 143.4% PF07654 5.3e-41 146.8% 1fyzC(135-282) 1e-25 7.33% 1d2oA1(2-82) 3e-16 13.19% d.19.1 2.9e-47 155.4% b.1.1 3.6e-29 89.7%

Sequence

MSGMVALRLPRGLWTAALTVMLVVLGAPVAEGRDSPQDFVFQFKGECYFYNGTQRVRGVA
RYIYNQEEHLRFDSDVGEFRAVTPLGRPEADSWNSQKDVLEQMRAEVDRVCKHNYQIEEG
TTLQRRVQPTVTISPSKAEALNHHNLLVCAVTDFYPSQVKVQWFRNGQEETAGVVSTPLI
RNGDWTYQVLVMLEMNLQRGDVYTCRVEHSSLQNPILVEWRAQSESAQSKMLSGVGGFVL
GLIFLGLGLFIRHRSQKGLVR

Region:1-261
Length:261aa
Label:Full sequence
Reset:click