Input sequence

Protein name SLA class II histocompatibility antigen, DQ haplotype D alpha chain
Organism Sus scrofa Length 255
Disorder content 12.5% ProS content 12.5%
IDEAL NA UniProt P15981

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 255 1-23 24-208 209-213 214-246 247-255 24-208 214-246 1-23 247-255 1-23 247-255 28-207 28-207 30-108 121-199 29-110 119-201 120-211 30-106 26-108 106-233 219-240 218-240 1jk8A(2-181) 1e-90 84.44% 1jk8A(2-181) 2e-50 84.44% PF00993(2-79) 7e-26 69.62% PF07654(3-81) 9e-07 34.18% PF00993 5.9e-55 193.2% PF07654 4.7e-38 137.0% 1d2oA1(2-89) 2e-18 9.78% 1a6aA2(1-76) 4e-18 51.95% d.19.1 2.5e-32 108.5% b.1.1 1.2e-27 85.1%

Sequence

MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYV
DLGKKETVWQLPLFSKFRSFDPQGALRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPK
SPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSETSFLSKNDHSFLKISYLTFL
PSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL

Region:1-255
Length:255aa
Label:Full sequence
Reset:click