Input sequence

Protein name SLA class II histocompatibility antigen, DQ haplotype C alpha chain
Organism Sus scrofa Length 254
Disorder content 11.8% ProS content 10.6%
IDEAL NA UniProt P15980

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 254 1-22 23-206 207-212 213-246 247-254 23-206 213-246 1-22 247-254 4-22 247-254 28-206 25-205 30-108 121-198 29-110 119-200 28-106 120-210 26-108 106-232 218-239 217-239 1jk8A(2-181) 2e-86 81.67% 1uvqA(1-182) 1e-48 78.57% PF00993(2-79) 1e-25 67.09% PF07654(3-81) 2e-05 35.44% PF00993 5.8e-54 189.9% PF07654 3.2e-33 121.0% 1hdmA2(2-79) 2e-18 17.72% 1d2oA1(2-89) 3e-18 9.89% d.19.1 1.2e-32 109.6% b.1.1 7.7e-26 79.4%

Sequence

MVPGRVLMWGALALTTVMSACGGEDIAADHVASYGLNVYQSYGPRGYFTHEFDGDEQFYV
DLEKKETVWRLPLFSEFTSFDPQGALRNIATLKHNLNIVTKRSNNTAAVNKVPEVTVFSK
SPVILGQPNTLICHVDSIFPPVINITWLKNGHSVKGFSETSFLSKNDHSFLKISYLTFLP
SDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLRSGGPSRHQGSL

Region:1-254
Length:254aa
Label:Full sequence
Reset:click