Input sequence

Protein name Sodium channel protein type 4 subunit alpha
Organism Rattus norvegicus Length 1840
Disorder content 17.4% ProS content 11.7%
IDEAL NA UniProt P15390

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1840 1-29 30-67 68-304 305-311 312-489 490-522 523-804 805-810 811-843 844-980 981-1323 1324-1327 1328-1745 1746-1840 1-29 68-304 312-489 523-804 811-843 981-1323 1328-1745 30-67 305-311 490-522 805-810 844-980 1324-1327 1746-1840 30-44 52-67 305-311 490-522 856-867 873-891 898-967 1324-1327 1746-1752 1762-1775 1797-1801 1828-1840 1595-1747 1301-1321 1595-1747 1301-1321 159-179 1062-1287 1381-1542 160-280 606-783 367-440 887-1034 159-440 606-795 810-1034 1060-1287 1380-1590 1341-1459 568-653 1020-1106 173-273 78-449 539-815 1004-1296 1330-1618 470-486 659-671 699-711 784-808 853-883 965-985 1120-1135 1565-1581 1804-1826 445-489 101-120 127-149 253-272 379-398 418-440 566-588 603-625 638-660 690-712 773-795 1024-1043 1064-1086 1090-1112 1145-1167 1266-1288 1342-1364 1377-1399 1404-1426 1478-1500 1566-1588 4dckA(1-153) 4e-65 77.12% 1byyA(1-21) 0.0002 95.24% 4dckA(1-153) 3e-53 77.12% 1byyA(1-21) 6e-06 95.24% 1qg9A(1-21) 0.0002 90.48% PF00520(3-198) 2e-34 40.71% PF00520(2-171) 4e-24 39.31% PF00520(2-124) 1e-19 38.58% PF00520(1-186) 7e-14 36.9% PF00520(126-198) 6e-11 41.89% PF06512(70-219) 2e-19 40.13% PF00520 4e-71 246.9% PF00520 4.3e-62 216.9% PF06512 1e-108 371.7% PF00520 2.5e-71 247.5% PF00520 2e-64 224.6% 1orsC(1-117) 8e-23 17.36% 1orsC(2-87) 4e-13 11.49% 1orsC(2-86) 1e-10 12.64% 2e9xC1(1-103) 1e-12 11.5% f.14.1 1.9e-28 98.8% f.14.1 2.6e-29 101.8% f.14.1 1.1e-37 130.9% f.14.1 4.1e-36 125.5%

Sequence

MASSSLPNLVPPGPHCLRPFTPESLAAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYLLSPFSIV
RRVAIKVLIHALFSMFIMITILTNCVFMTMSNPPSWSKHVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNDTNTTWYGNDTW
YSNDTWYGNDTWYINDTWNSQESWAGNSTFDWEAYINDEGNFYFLEGSNDALLCGNSSDA
GHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKYKKHQEELEKAK
AAQALESGEEADGDPTHNKDCNGSLDASGEKGPPRPSCSADSAISDAMEELEEAHQKCPP
WWYKCAHKVLIWNCCAPWVKFKHIIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHF
DNVLSVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLS
VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSY
KECVCKIASDCNLPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVM
VIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKTFLLGLLRG
KILSPKEIILSLGEPGGAGENAEESTPEDEKKEPPPEDKELKDNHILNHVGLTDGPRSSI
ELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDAFSEPEDIKKPLQPLYDGNSSVCST
ADYKPPEEDPEEQAEENPEGEQPEECFTEACVKRCPCLYVDISQGRGKMWWTLRRACFKI
VEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVAY
GFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMR
VVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTSERFDISVVNNKS
ESESLMYTGQVRWMNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPHYEV
NLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPQNKIQGMVYDFVTKQVFDISIMILICLNMVTMMVETDDQSQLKVDILYN
INMVFIIIFTGECVLKMFALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLF
RVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYV
KKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTNVRGD
CGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLSEDDFEMFYETWEKF
DPDATQFIDYSRLSDFVDTLQEPLKIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEV
LGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRSV
KQASYMYRHSQDGNDDGAPEKEGLLANTMNKMYGHEKEGDGVQSQGEEEKASTEDAGPTV
EPEPTSSSDTALTPSPPPLPPSSSPPQGQTVRPGVKESLV

Region:1-1840
Length:1840aa
Label:Full sequence
Reset:click