Input sequence

Protein name Sodium channel protein type 5 subunit alpha
Organism Rattus norvegicus Length 2019
Disorder content 25.4% ProS content 15.7%
IDEAL NA UniProt P15389

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2019 1-4 5-27 28-56 57-452 453-661 662-947 948-957 958-988 989-1054 1055-1058 1059-1162 1163-1929 1930-2019 5-27 57-452 662-947 958-988 1055-1058 1163-1929 1-4 28-56 453-661 948-957 989-1054 1059-1162 1930-2019 1-4 28-35 51-56 453-462 475-570 585-591 599-608 618-629 646-661 1005-1054 1059-1067 1073-1080 1088-1099 1139-1149 1930-1961 1977-1992 2011-2019 1778-1930 1485-1505 1778-1930 1485-1505 161-180 1245-1471 161-413 1565-1773 752-929 487-669 1131-1217 160-413 752-941 956-1217 1243-1471 1564-1773 1525-1612 714-800 1203-1289 174-274 768-837 1578-1689 119-422 685-971 1037-1480 1517-1801 475-485 571-585 805-817 845-857 930-947 1010-1027 1056-1067 1073-1085 1101-1113 1303-1318 1627-1646 1960-1982 414-452 128-150 254-276 392-414 715-737 750-772 787-808 840-862 882-899 919-941 1207-1226 1247-1264 1279-1301 1328-1350 1450-1472 1532-1549 1559-1579 1592-1614 1662-1684 1749-1771 4dckA(1-153) 5e-80 97.39% 1byyA(1-21) 8e-05 100.0% 4dckA(1-153) 2e-57 97.39% 1byyA(1-21) 5e-06 100.0% 1qg9A(2-21) 0.0001 90.0% PF00520(3-198) 3e-34 40.61% PF00520(2-198) 4e-25 29.73% PF00520(2-198) 1e-15 34.09% PF00520(1-186) 8e-13 37.97% PF11933(30-219) 1e-19 38.14% PF06512(133-219) 1e-13 41.67% PF00520 1.2e-73 255.3% PF00520 1.3e-58 205.3% PF06512 1.7e-145 493.9% PF00520 3.2e-70 243.9% PF00520 6.1e-60 209.7% 1orsC(1-89) 5e-18 11.24% 1orsC(2-88) 4e-13 11.36% 1orsC(2-86) 4e-11 12.64% 2e9xC1(1-103) 4e-14 12.39% 2e9xC1(3-83) 0.0002 12.35% 2e9xC1(1-105) 0.0002 12.93% f.14.1 1.8e-29 102.4% f.14.1 2.3e-28 98.5% f.14.1 1.5e-42 147.9% f.14.1 4.2e-35 121.9%

Sequence

MANLLLPRGTSSFRRFTRESLAAIEKRMAEKQARGGSATSQESREGLQEEEAPRPQLDLQ
ASKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHP
VRRAAVKILVHSLFSMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILAR
GFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTI
VGALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTELNGTNGSVEADGL
VWNSLDVYLNDPANYLLKNGTTDVLLCGNSSDAGTCPEGYRCLKAGENPDHGYTSFDSFA
WAFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQ
NQATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVTNHERKSKRR
KRLSSGTEDGGDDRLPKSDSEDGPRALNQLSLTHGLSRTSMRPRSSRGSIFTFRRRDQGS
EADFADDENSTAGESESHRTSLLVPWPLRHPSAQGQPGPGASAPGYVLNGKRNSTVDCNG
VVSLLGAGDAEATSPGSYLLRPMVLDRPPDTTTPSEEPGGPQMLTPQAPCADGFEEPGAR
QRALSAVSVLTSALEELEESHRKCPPCWNRFAQHYLIWECCPLWMSIKQKVKFVVMDPFA
DLTITMCIVLNTLFMALEHYNMTAEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQ
GWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGAL
GNLTLVLAIIVFIFAVVGMQLFGKNYSELRHRISDSGLLPRWHMMDFFHAFLIIFRILCG
EWIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDGEMN
NLQLALARIQRGLRFVKRTTWDFCCGILRRRPKKPAALATHSQLPSCITAPRSPPPPEVE
KVPPARKETRFEEDKRPGQGTPGDSEPVCVPIAVAESDTEDQEEDEENSLGTEEESSKQE
SQVVSGGHEPYQEPRAWSQVSETTSSEAGASTSQADWQQEQKTEPQAPGCGETPEDSYSE
GSTADMTNTADLLEQIPDLGEDVKDPEDCFTEGCVRRCPCCMVDTTQSPGKVWWRLRKTC
YRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKW
VAYGFKKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFE
GMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIV
NNKSECESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQP
QWEDNLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKVN
ILAKINLLFVAIFTGECIVKMAALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFS
PTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMAN
FAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNSNGS
RGNCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIW
EKFDPEATQFIEYLALSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAFT
KRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATVIQRAFRRHLLQ
RSVKHASFLFRQQAGGSGLSDEDAPEREGLIAYMMNGNFSRRSAPLSSSSISSTSFPPSY
DSVTRATSDNLPVRASDYSRSEDLADFPPSPDRDRESIV

Region:1-2019
Length:2019aa
Label:Full sequence
Reset:click