Input sequence

Protein name CD44 antigen
Organism Mus musculus Length 778
Disorder content 82.0% ProS content 43.6%
IDEAL IID50199 UniProt P15379

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 778 1-17 18-134 135-685 686-708 709-778 18-134 686-708 1-17 135-685 709-778 1-17 135-161 193-224 241-248 257-260 281-288 311-317 326-334 359-372 382-406 435-442 458-466 481-494 508-534 556-579 591-613 629-640 653-658 681-685 709-728 735-738 743-778 22-171 22-171 33-122 33-122 23-171 22-170 249-274 315-328 427-437 638-651 687-701 686-708 2jcpA(1-150) 5e-86 100.0% 2jcpA(1-150) 4e-59 100.0% PF00193(1-92) 7e-09 38.04% PF00193 1.4e-39 142.1% 1uuhA(2-149) 1e-49 85.91% d.169.1 1.3e-51 176.0%

Sequence

MDKFWWHTAWGLCLLQLSLAHQQIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNS
TLPTMDQMKLALSKGFETCRYGFIEGNVVIPRIHPNAICAANHTGVYILVTSNTSHYDTY
CFNASAPPEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDIDASNIIDDD
VSSGSTIEKSTPEGYILHTYLPTEQPTGDQDDSFFIRSTLATIASTVHSKSHAAAQKQNN
WIWSWFGNSQSTTQTQEPTTSATTALMTTPETPPKRQEAQNWFSWLFQPSESKSHLHTTT
KMPGTESNTNPTGWEPNEENEDETDTYPSFSGSGIDDDEDFISSTIATTPRVSARTEDNQ
DWTQWKPNHSNPEVLLQTTTRMADIDRISTSAHGENWTPEPQPPFNNHEYQDEEETPHAT
STTPNSTAEAAATQQETWFQNGWQGKNPPTPSEDSHVTEGTTASAHNNHPSQRITTQSQE
DVSWTDFFDPISHPMGQGHQTESKDTDSSHSTTLQPTAAPNTHLVEDLNRTGPLSVTTPQ
SHSQNFSTLHGEPEEDENYPTTSILPSSTKSSAKDARRGGSLPTDTTTSVEGYTFQYPDT
MENGTLFPVTPAKTEVFGETEVTLATDSNVNVDGSLPGDRDSSKDSRGSSRTVTHGSELA
GHSSANQDSGVTTTSGPMRRPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVI
NGGNGTVEDRKPSELNGEASKSQEMVHLVNKEPSETPDQCMTADETRNLQSVDMKIGV

Region:1-778
Length:778aa
Label:Full sequence
Reset:click