Input sequence

Protein name Collagen alpha-1(XII) chain
Organism Gallus gallus Length 3124
Disorder content 23.8% ProS content 17.0%
IDEAL NA UniProt P13944

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 3124 1-26 27-100 101-106 107-129 130-321 322-339 340-410 411-415 416-434 435-514 515-537 538-617 618-639 640-714 715-721 722-759 760-763 764-904 905-913 914-989 990-1005 1006-1077 1078-1088 1089-1124 1125-1130 1131-1170 1171-1187 1188-1269 1270-1284 1285-1286 1287-1291 1292-1298 1299-1376 1377-1393 1394-1732 1733-1737 1738-1758 1759-2158 2159-2163 2164-2248 2249-2252 2253-2291 2292-2308 2309-2420 2421-2426 2427-2511 2512-2539 2540-2679 2680-3124 27-100 130-321 340-410 435-514 538-617 640-714 722-759 764-904 914-989 1006-1077 1089-1124 1131-1170 1188-1269 1285-1286 1299-1376 1394-1732 1759-2158 2164-2248 2253-2291 2309-2420 2427-2511 2540-2679 1-26 107-129 322-339 416-434 515-537 618-639 715-721 905-913 990-1005 1078-1088 1171-1187 1270-1284 1287-1291 1377-1393 1738-1758 2249-2252 2292-2308 2512-2539 2680-3124 1-17 107-116 335-339 416-421 515-526 635-639 715-721 905-913 990-994 1001-1005 1078-1088 1171-1178 1270-1284 1387-1393 1738-1748 2249-2252 2292-2297 2512-2539 2683-2693 2703-2715 2724-2737 2747-2900 2925-2934 2954-3111 1474-1827 1941-2197 633-884 2120-2296 2512-2728 1368-1565 950-1181 139-307 439-600 1197-1351 2317-2500 815-989 1852-2019 1760-1908 25-116 337-421 136-317 437-616 1196-1376 2324-2507 2512-2728 1941-2201 635-809 2122-2294 1387-1559 815-989 1658-1833 909-1175 1756-2026 1475-1650 1564-1661 25-111 335-421 139-287 1199-1347 2327-2492 439-603 907-984 2122-2190 25-103 139-311 333-412 439-611 631-712 722-800 812-896 905-987 1086-1166 1199-1371 1385-1463 1475-1555 1567-1645 1656-1733 1756-1840 1848-1930 1937-2020 2028-2112 2120-2197 2208-2288 2327-2500 2751-2810 2822-2881 2935-2993 2994-3051 132-316 430-616 2326-2505 1182-1389 2524-2725 1414-1535 1089-1177 723-800 633-718 2137-2199 349-414 924-998 1941-2026 1758-1832 2032-2117 24-105 1657-1729 1488-1677 2212-2292 816-884 2093-2165 26-112 132-317 333-421 430-617 636-719 717-809 814-903 906-993 1028-1101 1086-1179 1192-1377 1386-1474 1474-1564 1572-1660 1644-1754 1756-1845 1847-1935 1939-2028 2028-2117 2120-2206 2213-2298 2321-2511 2502-2711 4-20 321-334 885-905 1617-1628 1834-1845 1909-1940 2298-2316 2342-2352 2751-2769 2778-2807 2821-2846 2848-2885 2945-2985 2999-3011 3014-3046 3088-3097 1fnfA(1-346) 2e-29 30.28% 1fnfA(98-355) 4e-22 27.31% 1fnfA(97-346) 9e-22 29.8% 1fnfA(2-186) 6e-13 30.81% 2uurA(3-210) 5e-27 32.72% 3t1wA(173-366) 4e-18 32.34% 3t1wA(50-281) 8e-18 27.66% 1pt6A(3-182) 3e-21 34.62% 1pt6A(3-175) 3e-18 30.86% 4igiA(1-157) 6e-21 37.34% 4nehA(122-310) 4e-16 32.81% 1qr4A(2-171) 1e-11 29.14% 1qr4A(4-168) 1e-09 32.14% 4lxoA(5-153) 3e-05 23.18% 3teuA(2-92) 6e-12 39.78% 3teuA(6-90) 2e-09 31.76% 1lfaA(1-181) 6e-53 26.78% 1lfaA(2-180) 6e-49 24.86% 1lfaA(1-180) 4e-46 17.03% 1lfaA(1-182) 7e-42 22.16% 2uurA(3-210) 8e-41 32.72% 1tdqA(7-267) 4e-25 23.19% 1qr4A(4-175) 1e-24 29.14% 1qr4A(2-175) 7e-23 23.56% 1qr4A(2-170) 3e-21 23.56% 1qr4A(2-171) 2e-20 29.14% 1qr4A(2-163) 9e-18 22.73% 4gh7B(5-275) 6e-19 23.81% 4gh7B(1-275) 4e-18 22.1% 2geeA(8-184) 2e-14 25.14% 2ee3A(5-103) 3e-10 29.29% 2ee3A(8-94) 8e-09 20.69% 2h41A(8-94) 7e-11 24.14% PF00092(1-148) 5e-13 33.99% PF00092(1-148) 3e-12 34.87% PF00092(1-162) 6e-12 34.32% PF00092(1-162) 4e-11 30.18% PF00041(1-82) 2e-05 36.59% PF00041(2-75) 0.0007 40.54% PF00041 4.5e-18 70.6% PF00092 1.8e-70 244.7% PF00041 2.9e-17 68.0% PF00092 1.5e-67 235.0% PF00041 7.9e-14 56.5% PF00041 1.9e-20 78.6% PF00041 1.1e-07 36.2% PF00041 1.2e-13 56.0% PF00041 1e-10 46.2% PF00092 2.5e-70 244.3% PF00041 5.7e-20 76.9% PF00041 6.8e-15 60.1% PF00041 3.1e-17 67.9% PF00041 1.9e-11 48.7% PF00041 1e-19 76.1% PF00041 3.9e-10 44.3% PF00041 5e-17 67.2% PF00041 4.9e-16 63.9% PF00041 6.7e-18 70.1% PF00041 6.3e-09 40.3% PF00092 7.1e-63 219.5% PF01391 8.8e-06 26.8% PF01391 2.1e-14 58.5% PF01391 1.7e-05 21.3% PF01391 0.00017 2.7% 1ao3A(1-187) 4e-35 27.51% 1ao3A(1-187) 3e-33 19.9% 1ao3A(5-187) 1e-30 23.37% 1auqA(2-208) 3e-31 17.29% 1z78A1(3-205) 1e-16 14.22% 1lmiA(2-127) 6e-14 8.66% 1j8kA(4-92) 3e-08 31.46% 1fnhA2(3-80) 6e-11 23.08% 1fnhA2(4-89) 3e-08 17.44% 1q38A(2-66) 7e-11 24.62% 1q38A(1-66) 3e-10 18.18% 1q38A(3-77) 2e-09 22.37% 1fnfA2(4-90) 8e-11 26.44% 1fnfA2(2-77) 5e-09 26.32% 1fnfA3(4-89) 3e-08 27.91% 1qg3A1(1-82) 5e-07 18.29% 1qg3A1(3-75) 5e-07 23.29% 1cfmA1(2-184) 4e-10 8.76% 1a22B1(2-86) 4e-05 11.76% 2ibbA1(10-77) 0.0003 23.19% 1n98.1(5-89) 0.0006 9.41% b.1.2 4.4e-16 52.1% c.62.1 4.6e-61 202.7% b.1.2 2.1e-19 66.9% c.62.1 2.6e-58 193.6% b.1.2 3.6e-18 58.5% b.1.2 1e-21 72.1% b.1.2 9e-14 46.1% b.1.2 1.2e-19 67.8% b.1.2 7e-07 23.4% b.1.2 1.1e-20 71.3% c.62.1 2.4e-60 200.3% b.1.2 3.2e-20 65.4% b.1.2 3.1e-17 59.5% b.1.2 2.5e-18 59.1% b.1.2 7.3e-15 52.6% b.1.2 6.3e-22 75.5% b.1.2 9.4e-17 57.8% b.1.2 6.1e-23 74.1% b.1.2 3e-19 66.4% b.1.2 5.1e-20 69.0% b.1.2 4.5e-15 48.5% c.62.1 2.8e-57 187.2% b.29.1 3.8e-10 30.4%

Sequence

MRTALCSAVAALCAAALLSSIEAEVNPPSDLNFTIIDEHNVQMSWKRPPDAIVGYRITVV
PTNDGPTKEFTLSPSTTQTVLSDLIPEIEYVVSIASYDEVEESLPVFGQLTIQTGGPGIP
EEKKVEAQIQKCSISAMTDLVFLVDGSWSVGRNNFRYILDFMVALVSAFDIGEEKTRVGV
VQYSSDTRTEFNLNQYFRRSDLLDAIKRIPYKGGNTMTGEAIDYLVKNTFTESAGARKGF
PKVAIVITDGKAQDEVEIPARELRNIGVEVFSLGIKAADAKELKLIASQPSLKHVFNVAN
FDGIVDIQNEIILQVCSGVDEQLGELVSGEEVVEPASNLVATQISSKSVRITWDPSTSQI
TGYRVQFIPMIAGGKQHVLSVGPQTTALNVKDLSPDTEYQINVYAMKGLTPSEPITIMEK
TQQVKVQVECSRGVDVKADVVFLVDGSYSIGIANFVKVRAFLEVLVKSFEISPRKVQISL
VQYSRDPHMEFSLNRYNRVKDIIQAINTFPYRGGSTNTGKAMTYVREKVFVTSKGSRPNV
PRVMILITDGKSSDAFKEPAIKLRDADVEIFAVGVKDAVRTELEAIASPPAETHVYTVED
FDAFQRISFELTQSVCLRIEQELAAIRKKSYVPAKNMVFSDVTSDSFKVSWSAAGSEEKS
YLIKYKVAIGGDEFIVSVPASSTSSVLTNLLPETTYAVSVIAEYEDGDGPPLDGEETTLE
VKGAPRNLRITDETTDSFIVGWTPAPGNVLRYRLVYRPLTGGERRQVTVSANERSTTLRN
LIPDTRYEVSVIAEYQSGPGNALNGYAKTDEVRGNPRNLRVSDATTSTTMKLSWSAAPGK
VQHVLYNLHTRYAGVETKELTVKGDTTSKELKGLDEATRYALTVSALYASGAGEALSGEG
ETLEERGSPRNLITTDITDTTVGLSWTPAPGTVNNYRIVWKSLYDDTMGEKRVPGNTVDA
VLDGLEPETKYRISIYAAYSSGEGDPVEGEAFTDVSQSARTVTVDNETENTMRVSVAALT
WEGLVLARVLPNRSGGRQMFGKVNASATSIVLKRLKPRTTYDLSVVPIYDFGQGKSRKAE
GTTASPFKPPRNLRTSDSTMSSFRVTWEPAPGRVKGYKVTFHPTEDDRNLGELVVGPYDS
TVVLEELRAGTTYKVNVFGMFDGGESNPLVGQEMTTLSDTTTEPFLSRGLECRTRAEADI
VLLVDGSWSIGRPNFKTVRNFISRIVEVFDIGPDKVQIGLAQYSGDPRTEWNLNAYRTKE
ALLDAVTNLPYKGGNTLTGMALDFILKNNFKQEAGLRPRARKIGVLITDGKSQDDVVTPS
RRLRDEGVELYAIGIKNADENELKQIATDPDDIHAYNVADFSFLASIGEDVTTNLCNSVK
GPGDLPPPSNLVISEVTPHSFRLRWSPPPESVDRYRVEYYPTTGGPPKQFYVSRMETTTV
LKDLTPETEYIVNVFSVVEDESSEPLIGREITYPLSSVRNLNVYDIGSTSMRVRWEPVNG
ATGYLLTYEPVNATVPTTEKEMRVGPSVNEVQLVDLIPNTEYTLTAYVLYGDITSDPLTS
QEVTLPLPGPRGVTIRDVTHSTMNVLWDPAPGKVRKYIIRYKIADEADVKEVEIDRLKTS
TTLTDLSSQRLYNVKVVAVYDEGESLPVVASCYSAVPSPVNLRITEITKNSFRGTWDHGA
PDVSLYRITWGPYGRSEKAESIVNGDVNSLLFENLNPDTLYEVSVTAIYPDESETVDDLI
GSERTLPLVPITTPAPKSGPRNLQVYNATSHSLTVKWDPASGRVQRYKIIYQPINGDGPE
QSTMVGGRQNSVVIQKLQPDTPYAITVSSMYADGEGGRMTGRGRTKPLTTVKNMLVYDPT
TSTLNVRWDHAEGNPRQYKVFYRPTAGGAEEMTTVPGNTNYVILRSLEPNTPYTVTVVPV
FPEGDGGRTTDTGRTLERGTPRNIQVYNPTPNSMNVRWEPAPGPVQQYRVNYSPLSGPRP
SESIVVPANTRDVMLERLTPDTAYSINVIALYADGEGNPSQAQGRTLPRSGPRNLRVFDE
TTNSLSVQWDHADGPVQQYRIIYSPTVGDPIDEYTTVPGIRNNVILQPLQSDTPYKITVV
AVYEDGDGGQLTGNGRTVGLLPPQNIYITDEWYTRFRVSWDPSPSPVLGYKIVYKPVGSN
EPMEVFVGEVTSYTLHNLSPSTTYDVNVYAQYDSGMSIPLTDQGTTLYLNVTDLTTYKIG
WDTFCIRWSPHRSATSYRLKLNPADGSRGQEITVRGSETSHCFTGLSPDTEYNATVFVQT
PNLEGPPVSVREHTVLKPTEAPTPPPTPPPPPTIPPARDVCRGAKADIVFLTDASWSIGD
DNFNKVVKFVFNTVGAFDLINPAGIQVSLVQYSDEAQSEFKLNTFDDKAQALGALQNVQY
RGGNTRTGKALTFIKEKVLTWESGMRRGVPKVLVVVTDGRSQDEVRKAATVIQHSGFSVF
VVGVADVDYNELAKIASKPSERHVFIVDDFDAFEKIQDNLVTFVCETATSTCPLIYLEGY
TSPGFKMLESYNLTEKHFASVQGVSLESGSFPSYVAYRLHKNAFVSQPIREIHPEGLPQA
YTIIMLFRLLPESPSEPFAIWQITDRDYKPQVGVVLDPGSKVLSFFNKDTRGEVQTVTFD
NDEVKKIFYGSFHKVHIVVTSSNVKIYIDCSEILEKPIKEAGNITTDGYEILGKLLKGDR
RSATLEIQNFDIVCSPVWTSRDRCCDLPSMRDEAKCPALPNACTCTQDSVGPPGPPGPPG
GPGAKGPRGERGLTGSSGPPGPRGETGPPGPQGPPGPQGPNGLQIPGEPGRQGMKGDAGQ
PGLPGRSGTPGLPGPPGPVGPPGERGFTGKDGPTGPRGPPGPAGAPGVPGVAGPSGKPGK
PGDRGTPGTPGMKGEKGDRGDIASQNMMRAVARQVCEQLINGQMSRFNQMLNQIPNDYYS
NRNQPGPPGPPGPPGAAGTRGEPGPGGRPGFPGPPGVQGPPGERGMPGEKGERGTGSQGP
RGLPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNAGIRGPPGPPGYCDSSQCASIPYNG
QGFPEPYVPESGPYQPEGEPFIVPMESERREDEYEDYGVEMHSPEYPEHMRWKRSLSRKA
KRKP

Region:1-3124
Length:3124aa
Label:Full sequence
Reset:click