Input sequence

Protein name RNase E specificity factor CsrD
Organism EColi Length 646
Disorder content 1.9% ProS content 1.9%
IDEAL NA UniProt P13518

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP COILS:coiledCoil TMHMM:TMhelix 0 646 1-9 10-643 644-646 10-643 1-9 644-646 1-9 644-646 210-632 202-633 403-628 227-380 220-381 395-630 230-386 415-628 199-226 10-32 130-152 3pjxA(5-421) 3e-29 23.36% 3pjxA(3-420) 6e-73 23.11% PF00563(4-234) 1e-16 25.86% PF00990(4-159) 1e-09 28.48% PF00990 5.9e-42 150.0% PF00563 1.8e-59 208.1% 1w25A3(2-160) 3e-19 21.12% 2basA1(17-229) 5e-14 18.18%

Sequence

MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV
LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR
LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER
GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN
QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL
LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT
EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL
AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG
VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV
YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV

Region:1-646
Length:646aa
Label:Full sequence
Reset:click