Input sequence

Protein name RNA polymerase sigma factor RpoS
Organism EColi Length 330
Disorder content 18.8% ProS content 12.1%
IDEAL NA UniProt P13445

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP 0 330 1-47 48-315 316-330 48-315 1-47 316-330 1-25 316-330 71-314 55-322 94-145 173-247 55-91 94-164 168-250 262-315 55-161 165-223 224-320 55-161 167-241 224-328 4jk1X(261-507) 3e-54 42.11% 4jk1X(245-515) 6e-51 39.48% PF04542(1-52) 1e-06 51.92% PF04539(1-75) 7e-06 36.0% PF00140 3.1e-13 54.5% PF04542 5.2e-27 100.3% PF04539 1.3e-27 102.3% PF04545 1.6e-18 72.2% 1sigA(196-305) 5e-27 49.09% 1iw7F1(1-61) 1e-09 37.7% 1iw7F2(1-92) 7e-09 28.87% a.177.1 2.8e-47 162.5% a.4.13 8e-18 60.3% a.4.13 1.5e-23 84.8%

Sequence

MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEQEPSDNDLAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNIEALFRE

Region:1-330
Length:330aa
Label:Full sequence
Reset:click