Input sequence

Protein name Collagen alpha-3(VI) chain
Organism Homo sapiens Length 3177
Disorder content 17.2% ProS content 12.3%
IDEAL NA UniProt P12111

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 3177 1-29 30-336 337-341 342-1122 1123-1126 1127-1218 1219-1224 1225-1619 1620-1632 1633-2021 2022-2077 2078-2134 2135-2214 2215-2220 2221-2382 2383-2677 2678-2682 2683-2846 2847-3009 3010-3070 3071-3106 3107-3177 30-336 342-1122 1127-1218 1225-1619 1633-2021 2078-2134 2215-2220 2383-2677 2683-2846 3010-3070 3107-3177 1-29 1219-1224 1620-1632 2022-2077 2135-2214 2221-2382 2847-3009 3071-3106 4-29 1219-1224 1620-1632 2022-2077 2135-2214 2221-2382 2855-2862 2908-2930 2995-3000 3005-3009 3071-3077 1027-1222 1436-1609 1231-1419 443-597 242-431 835-1009 637-802 39-192 1639-1790 3108-3165 2395-2807 1027-1222 1435-1609 1231-1419 443-610 241-434 835-1017 36-219 637-803 1631-1831 2618-2804 2388-2538 3108-3165 2080-2174 2315-2371 2993-3074 3112-3162 39-189 242-393 1233-1382 445-596 639-790 1639-1790 2316-2371 39-213 242-415 445-620 639-812 837-1009 1029-1201 1233-1404 1436-1609 1639-1812 2038-2097 2104-2163 2174-2233 2234-2293 2314-2373 2402-2581 2619-2810 3111-3163 36-219 1222-1415 431-627 1426-1611 241-424 827-1023 1631-1793 2604-2806 1025-1208 635-804 3110-3163 2400-2663 2316-2374 2085-2163 2993-3061 37-221 240-423 445-610 637-820 837-1015 1023-1212 1227-1415 1430-1620 1633-1823 1835-2030 2395-2591 2612-2806 2984-3076 3106-3170 703-720 805-816 1617-1630 1802-1816 2002-2017 2044-2077 2104-2125 2177-2225 2228-2240 2243-2294 2300-2314 2856-2898 2905-2967 2974-2987 3075-3094 4igiA(1-196) 2e-90 85.2% 4igiA(3-175) 9e-38 48.28% 4igiA(1-190) 3e-35 42.11% 4igiA(1-154) 1e-30 40.65% 4igiA(3-192) 2e-29 35.6% 4igiA(1-175) 2e-27 34.86% 4igiA(1-165) 4e-22 39.76% 4igiA(3-156) 1e-20 36.77% 4igiA(3-153) 3e-16 32.89% 1kthA(1-58) 7e-32 100.0% 4cn9A(4-381) 4e-09 21.7% 4igiA(1-196) 1e-54 85.2% 4igiA(2-175) 6e-35 47.43% 4igiA(1-190) 7e-34 42.11% 4igiA(1-167) 5e-30 38.69% 4igiA(2-194) 5e-30 34.02% 4igiA(1-183) 2e-24 33.33% 1lfaA(1-181) 4e-43 19.46% 1lfaA(2-166) 5e-27 21.76% 1ijbA(7-202) 5e-27 18.63% 1ijbA(14-184) 6e-12 17.55% 1ijbA(2-147) 4e-09 18.3% 1kthA(1-58) 1e-23 100.0% 2pneA(6-76) 1e-11 33.68% 2pneA(13-76) 7e-11 34.38% 2ee3A(12-93) 1e-07 23.17% PF00014(2-52) 1e-13 56.86% PF00092(1-148) 9e-13 33.55% PF00092(1-148) 1e-08 31.01% PF00092(1-148) 4e-08 31.61% PF00092(1-148) 2e-07 30.77% PF00092(1-148) 2e-06 30.72% PF00092(1-148) 6e-06 31.25% PF01391(8-63) 2e-08 55.36% PF00092 3.7e-63 220.4% PF00092 1.8e-54 191.6% PF00092 1.2e-56 198.7% PF00092 4.8e-60 210.1% PF00092 5.5e-45 160.0% PF00092 1.2e-55 195.5% PF00092 2.9e-56 197.5% PF00092 4.7e-59 206.8% PF00092 1.9e-46 164.9% PF01391 2.2e-11 48.4% PF01391 2.4e-12 51.6% PF01391 4e-08 37.6% PF01391 4.3e-07 34.2% PF01391 6.7e-13 53.5% PF00092 4.6e-23 87.2% PF00092 1.1e-28 105.9% PF00014 1.6e-28 105.4% 1cqpA(1-181) 6e-30 21.62% 1auqA(6-204) 6e-28 18.72% 1auqA(3-200) 5e-22 18.63% 1auqA(3-195) 1e-21 18.18% 1auqA(16-202) 7e-21 19.27% 1auqA(7-207) 2e-16 19.81% 1auqA(9-172) 2e-16 19.05% 1auqA(3-188) 6e-14 16.75% 1ao3A(2-186) 2e-21 24.47% 1ao3A(2-171) 6e-18 21.39% 1aalA(3-56) 4e-22 29.63% 1m2oA3(2-256) 4e-09 10.62% 1af0A1(154-224) 2e-10 9.86% 1af0A1(145-223) 2e-07 13.92% 1fnhA2(6-74) 0.0003 18.84% c.62.1 1.5e-53 175.6% c.62.1 2.8e-45 148.5% c.62.1 2e-44 147.4% c.62.1 2.1e-55 181.8% c.62.1 4e-41 136.5% c.62.1 7.4e-49 159.6% c.62.1 7.7e-47 153.0% c.62.1 1.3e-47 155.6% c.62.1 5.6e-43 140.4% c.62.1 3.1e-23 77.1% c.62.1 6.1e-30 101.1% c.62.1 1.3e-27 93.2% b.1.2 2.8e-08 28.0% g.8.1 2.3e-21 73.6%

Sequence

MRKHRHLPLVAVFCLFLSGFPTTHAQQQQADVKNGAAADIIFLVDSSWTIGEEHFQLVRE
FLYDVVKSLAVGENDFHFALVQFNGNPHTEFLLNTYRTKQEVLSHISNMSYIGGTNQTGK
GLEYIMQSHLTKAAGSRAGDGVPQVIVVLTDGHSKDGLALPSAELKSADVNVFAIGVEDA
DEGALKEIASEPLNMHMFNLENFTSLHDIVGNLVSCVHSSVSPERAGDTETLKDITAQDS
ADIIFLIDGSNNTGSVNFAVILDFLVNLLEKLPIGTQQIRVGVVQFSDEPRTMFSLDTYS
TKAQVLGAVKALGFAGGELANIGLALDFVVENHFTRAGGSRVEEGVPQVLVLISAGPSSD
EIRYGVVALKQASVFSFGLGAQAASRAELQHIATDDNLVFTVPEFRSFGDLQEKLLPYIV
GVAQRHIVLKPPTIVTQVIEVNKRDIVFLVDGSSALGLANFNAIRDFIAKVIQRLEIGQD
LIQVAVAQYADTVRPEFYFNTHPTKREVITAVRKMKPLDGSALYTGSALDFVRNNLFTSS
AGYRAAEGIPKLLVLITGGKSLDEISQPAQELKRSSIMAFAIGNKGADQAELEEIAFDSS
LVFIPAEFRAAPLQGMLPGLLAPLRTLSGTPEVHSNKRDIIFLLDGSANVGKTNFPYVRD
FVMNLVNSLDIGNDNIRVGLVQFSDTPVTEFSLNTYQTKSDILGHLRQLQLQGGSGLNTG
SALSYVYANHFTEAGGSRIREHVPQLLLLLTAGQSEDSYLQAANALTRAGILTFCVGASQ
ANKAELEQIAFNPSLVYLMDDFSSLPALPQQLIQPLTTYVSGGVEEVPLAQPESKRDILF
LFDGSANLVGQFPVVRDFLYKIIDELNVKPEGTRIAVAQYSDDVKVESRFDEHQSKPEIL
NLVKRMKIKTGKALNLGYALDYAQRYIFVKSAGSRIEDGVLQFLVLLVAGRSSDRVDGPA
SNLKQSGVVPFIFQAKNADPAELEQIVLSPAFILAAESLPKIGDLHPQIVNLLKSVHNGA
PAPVSGEKDVVFLLDGSEGVRSGFPLLKEFVQRVVESLDVGQDRVRVAVVQYSDRTRPEF
YLNSYMNKQDVVNAVRQLTLLGGPTPNTGAALEFVLRNILVSSAGSRITEGVPQLLIVLT
ADRSGDDVRNPSVVVKRGGAVPIGIGIGNADITEMQTISFIPDFAVAIPTFRQLGTVQQV
ISERVTQLTREELSRLQPVLQPLPSPGVGGKRDVVFLIDGSQSAGPEFQYVRTLIERLVD
YLDVGFDTTRVAVIQFSDDPKVEFLLNAHSSKDEVQNAVQRLRPKGGRQINVGNALEYVS
RNIFKRPLGSRIEEGVPQFLVLISSGKSDDEVDDPAVELKQFGVAPFTIARNADQEELVK
ISLSPEYVFSVSTFRELPSLEQKLLTPITTLTSEQIQKLLASTRYPPPAVESDAADIVFL
IDSSEGVRPDGFAHIRDFVSRIVRRLNIGPSKVRVGVVQFSNDVFPEFYLKTYRSQAPVL
DAIRRLRLRGGSPLNTGKALEFVARNLFVKSAGSRIEDGVPQHLVLVLGGKSQDDVSRFA
QVIRSSGIVSLGVGDRNIDRTELQTITNDPRLVFTVREFRELPNIEERIMNSFGPSAATP
APPGVDTPPPSRPEKKKADIVFLLDGSINFRRDSFQEVLRFVSEIVDTVYEDGDSIQVGL
VQYNSDPTDEFFLKDFSTKRQIIDAINKVVYKGGRHANTKVGLEHLRVNHFVPEAGSRLD
QRVPQIAFVITGGKSVEDAQDVSLALTQRGVKVFAVGVRNIDSEEVGKIASNSATAFRVG
NVQELSELSEQVLETLHDAMHETLCPGVTDAAKACNLDVILGFDGSRDQNVFVAQKGFES
KVDAILNRISQMHRVSCSGGRSPTVRVSVVANTPSGPVEAFDFDEYQPEMLEKFRNMRSQ
HPYVLTEDTLKVYLNKFRQSSPDSVKVVIHFTDGADGDLADLHRASENLRQEGVRALILV
GLERVVNLERLMHLEFGRGFMYDRPLRLNLLDLDYELAEQLDNIAEKACCGVPCKCSGQR
GDRGPIGSIGPKGIPGEDGYRGYPGDEGGPGERGPPGVNGTQGFQGCPGQRGVKGSRGFP
GEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGNPGRRGDKGPRGEKGERGDVGIRGDPGNP
GQDSQERGPKGETGDLGPMGVPGRDGVPGGPGETGKNGGFGRRGPPGAKGNKGGPGQPGF
EGEQGTRGAQGPAGPAGPPGLIGEQGISGPRGSGGAAGAPGERGRTGPLGRKGEPGEPGP
KGGIGNRGPRGETGDDGRDGVGSEGRRGKKGERGFPGYPGPKGNPGEPGLNGTTGPKGIR
GRRGNSGPPGIVGQKGDPGYPGPAGPKGNRGDSIDQCALIQSIKDKCPCCYGPLECPVFP
TELAFALDTSEGVNQDTFGRMRDVVLSIVNDLTIAESNCPRGARVAVVTYNNEVTTEIRF
ADSKRKSVLLDKIKNLQVALTSKQQSLETAMSFVARNTFKRVRNGFLMRKVAVFFSNTPT
RASPQLREAVLKLSDAGITPLFLTRQEDRQLINALQINNTAVGHALVLPAGRDLTDFLEN
VLTCHVCLDICNIDPSCGFGSWRPSFRDRRAAGSDVDIDMAFILDSAETTTLFQFNEMKK
YIAYLVRQLDMSPDPKASQHFARVAVVQHAPSESVDNASMPPVKVEFSLTDYGSKEKLVD
FLSRGMTQLQGTRALGSAIEYTIENVFESAPNPRDLKIVVLMLTGEVPEQQLEEAQRVIL
QAKCKGYFFVVLGIGRKVNIKEVYTFASEPNDVFFKLVDKSTELNEEPLMRFGRLLPSFV
SSENAFYLSPDIRKQCDWFQGDQPTKNLVKFGHKQVNVPNNVTSSPTSNPVTTTKPVTTT
KPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPAT
AAKPVAAKPAAVRPPAAAAAKPVATKPEVPRPQAAKPAATKPATTKPMVKMSREVQVFEI
TENSAKLHWERAEPPGPYFYDLTVTSAHDQSLVLKQNLTVTDRVIGGLLAGQTYHVAVVC
YLRSQVRATYHGSFSTKKSQPPPPQPARSASSSTINLMVSTEPLALTETDICKLPKDEGT
CRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAPVLAKPGVISVMGT

Region:1-3177
Length:3177aa
Label:Full sequence
Reset:click