Input sequence

Protein name Collagen alpha-1(VI) chain
Organism Homo sapiens Length 1028
Disorder content 35.7% ProS content 35.2%
IDEAL NA UniProt P12109

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1028 1-22 23-50 51-54 55-143 144-148 149-266 267-319 320-326 327-337 338-340 341-611 612-620 621-625 626-837 838-842 843-881 882-886 887-1028 23-50 55-143 149-266 320-326 338-340 612-620 626-837 843-881 887-1028 1-22 267-319 327-337 341-611 621-625 838-842 1-22 267-319 327-337 341-611 838-842 615-1012 319-377 612-810 827-1012 35-251 261-366 37-209 615-756 37-228 257-316 332-391 395-454 458-517 532-592 615-801 829-1013 24-249 613-810 825-1012 247-379 31-249 609-816 822-1024 3-18 299-317 380-413 415-446 455-471 482-506 547-561 575-591 4cn9A(10-375) 3e-10 22.8% 2pneA(2-58) 0.0006 40.68% 1lfaA(1-180) 3e-19 15.61% 1lfaA(2-168) 7e-17 12.17% 1lfaA(2-183) 3e-11 13.7% 2pneA(1-80) 2e-11 30.19% PF00092(1-153) 2e-05 27.75% PF00092(1-135) 0.0005 28.77% PF00092 1.5e-23 88.9% PF01391 3.2e-11 47.9% PF01391 3.1e-14 57.9% PF01391 1.5e-09 42.3% PF01391 3.5e-11 47.7% PF01391 0.0002 1.7% PF00092 2.3e-32 118.1% PF00092 1.9e-34 125.1% 1auqA(1-207) 1e-22 14.41% 1ao3A(4-187) 2e-20 16.51% 1aoxA(3-183) 4e-17 17.71% 1af0A1(74-223) 2e-08 10.0% c.62.1 7.6e-38 125.5% c.62.1 8.1e-35 113.7% c.62.1 9.2e-29 97.1%

Sequence

MRAARALLPLLLQACWTAAQDEPETPRAVAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKSFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEVEIIQGLTRMPGGRDALKSSVDAV
KYFGKGTYTDCAIKKGLEQLLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGVKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDAEEAISQTIDTIVDMIK
NNVEQVCCSFECQPARGPPGLRGDPGFEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM
KGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGVKGEMGYPGLPGCKGSPGFDGIQGPPGP
KGDPGAFGLKGEKGEPGADGEAGRPGSSGPSGDEGQPGEPGPPGEKGEAGDEGNPGPDGA
PGERGGPGERGPRGTPGTRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGD
EGPPGSEGARGAPGPAGPPGDPGLMGERGEDGPAGNGTEGFPGFPGYPGNRGAPGINGTK
GYPGLKGDEGEAGDPGDDNNDIAPRGVKGAKGYRGPEGPQGPPGHQGPPGPDECEILDII
MKMCSCCECKCGPIDLLFVLDSSESIGLQNFEIAKDFVVKVIDRLSRDELVKFEPGQSYA
GVVQYSHSQMQEHVSLRSPSIRNVQELKEAIKSLQWMAGGTFTGEALQYTRDQLLPPSPN
NRIALVITDGRSDTQRDTTPLNVLCSPGIQVVSVGIKDVFDFIPGSDQLNVISCQGLAPS
QGRPGLSLVKENYAELLEDAFLKNVTAQICIDKKCPDYTCPITFSSPADITILLDGSASV
GSHNFDTTKRFAKRLAERFLTAGRTDPAHDVRVAVVQYSGTGQQRPERASLQFLQNYTAL
ASAVDAMDFINDATDVNDALGYVTRFYREASSGAAKKRLLLFSDGNSQGATPAAIEKAVQ
EAQRAGIEIFVVVVGRQVNEPHIRVLVTGKTAEYDVAYGESHLFRVPSYQALLRGVFHQT
VSRKVALG

Region:1-1028
Length:1028aa
Label:Full sequence
Reset:click