Input sequence

Protein name Collagen alpha-1(XI) chain
Organism Homo sapiens Length 1806
Disorder content 75.6% ProS content 72.8%
IDEAL NA UniProt P12107

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1806 1-40 41-108 109-112 113-251 252-1576 1577-1806 41-108 113-251 1577-1806 1-40 252-1576 1-40 252-252 262-325 333-347 356-411 416-503 527-1576 1596-1805 73-229 780-861 1596-1805 45-241 773-861 1593-1804 105-228 442-501 524-582 583-642 643-702 703-762 763-822 823-882 883-942 943-1002 1003-1062 1066-1125 1126-1185 1186-1245 1246-1305 1306-1365 1366-1425 1426-1485 1486-1545 1593-1804 1547-1751 39-229 786-864 56-244 1591-1645 17-28 258-282 380-392 442-496 511-528 535-598 613-664 682-736 748-763 874-949 954-1003 1032-1064 1068-1102 1105-1123 1141-1162 1185-1234 1237-1394 1419-1450 1455-1465 1480-1516 1525-1540 4ae2A(1-212) 8e-42 44.19% 2uurA(40-198) 6e-09 25.61% 2pneA(2-81) 1e-06 41.46% 4ae2A(1-212) 2e-43 40.93% 2uurA(19-210) 3e-26 23.27% 2pneA(1-81) 2e-10 37.08% PF01410(1-209) 8e-57 53.0% PF02210 1.5e-13 55.6% PF01391 1.4e-05 22.9% PF01391 1.1e-05 25.1% PF01391 5e-15 60.5% PF01391 5.7e-13 53.7% PF01391 3.6e-10 44.4% PF01391 1e-11 49.5% PF01391 2e-11 48.5% PF01391 1.2e-14 59.3% PF01391 5.3e-12 50.5% PF01391 4.4e-12 50.7% PF01391 1.7e-12 52.2% PF01391 1.4e-07 35.8% PF01391 2.5e-10 44.9% PF01391 1.5e-11 49.0% PF01391 3.9e-09 41.0% PF01391 8.5e-10 43.1% PF01391 1.8e-12 52.1% PF01391 3.7e-07 34.4% PF01410 9.7e-145 491.4% 1j83A(2-180) 4e-43 16.11% 1z78A1(4-194) 1e-24 16.42% 1af0A1(145-223) 6e-06 8.86% b.29.1 1.7e-31 76.2% d.171.1 9.5e-05 14.5%

Sequence

MEPWSSRWKTKRWLWDFTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYN
EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYS
PDCDSSAPKAAQAQEPQIDEYAPEDIIEYDYEYGEAEYKEAESVTEGPTVTEETIAQTEA
NIVDDFQEYNYGTMESYQTEAPRHVSGTNEPNPVEEIFTEEYLTGEDYDSQRKNSEDTLY
ENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHG
AYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLP
GADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP
GPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR
GFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTP
GAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP
GLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEK
GEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP
GLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKP
GPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT
GPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKD
GPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ
GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK
GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ
GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEA
GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP
GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAK
GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP
GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP
GPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPLPILSSKKTRRHTEG
MQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDG
EYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKL
LSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDE
EMSYDNNPFIKTLYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVG
PVCFLG

Region:1-1806
Length:1806aa
Label:Full sequence
Reset:click