Input sequence

Protein name Collagen alpha-1(IX) chain
Organism Gallus gallus Length 920
Disorder content 74.8% ProS content 74.8%
IDEAL NA UniProt P12106

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 920 1-232 233-920 1-232 233-920 233-920 42-256 668-742 42-256 668-747 265-323 324-382 383-442 452-511 512-571 572-631 632-691 695-754 785-844 847-905 56-252 667-747 104-256 269-291 294-315 336-371 374-398 422-479 482-513 547-581 601-662 785-864 876-897 7-26 2uurA(1-210) 5e-87 70.23% 2pneA(3-81) 7e-07 39.24% 2uurA(1-210) 3e-56 70.23% 2pneA(3-80) 2e-09 40.0% PF01391 5.2e-11 47.2% PF01391 1.9e-06 32.1% PF01391 3.3e-05 16.0% PF01391 1.8e-11 48.7% PF01391 2e-10 45.2% PF01391 8.2e-12 49.8% PF01391 1.3e-12 52.5% PF01391 1.4e-11 49.1% PF01391 1.7e-10 45.4% PF01391 8.2e-05 8.8% 1z78A1(3-205) 8e-18 14.76% 1af0A1(142-222) 2e-06 12.35% b.29.1 2.1e-10 31.9%

Sequence

MKSNWKITAFLYMCSFLGSFISATYQQQSRLPVILGARQRTDLCPTIRIGEDDLPGFDLI
SQFQIEKAASQGIVQRVVGSTALQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLNGPMKSVEFSYKGVDGSLQTASFLHLPFLFDSQW
HKLMISVETTSVTLFIDCIKVETLNIKPKGKISVDGFSVLGRLKNNPQISVPFEVQWMPI
HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG
PPGPDGDAGKAGSPGLPGEPGADGLTGPDGSPGATGPKGQKGEPGPPGARGLPGKGLLGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRPGH
AGLMGMKGQKGSKGESGELGKQGYKGEEGGQGPIGEVGAQGPLGIPGIRGITGITGPKGN
KGARGLDGGPGPQGLPGAPGGQGQRGPVGEEGPKGERGPQGTRGINGLPGPKGESGLPGV
DGREGIPGMPGAKGEPGKPGTPGDTGPPGLPGLPGSPGMKGIPGPKGNRGPPGVPGLMGN
SGKPGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGLPGPPGLPGG
KGDRGSAGEPGPKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGPEGSRGL
PGMEGPRGAPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLSQLAASLR
RPEFGAPGLPGRPGPPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGERGE
RGFPGRGVKGLPGPRGLPGEPGKPSYGREGRDGVRGPPGVAGQPGIPGPPGPPGPPGYCE
PSSCRMQAGQRAAGKNMKGP

Region:1-920
Length:920aa
Label:Full sequence
Reset:click