Input sequence

Protein name DNA-directed RNA polymerase subunit beta''
Organism Oryza sativa subsp.japonica Length 1513
Disorder content 1.5% ProS content 1.4%
IDEAL NA UniProt P0C509

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1513 1-2 3-430 431-435 436-709 710-720 721-875 876-880 881-1469 1470-1474 1475-1513 3-430 436-709 721-875 881-1469 1475-1513 1-2 710-720 876-880 1470-1474 710-720 876-880 1470-1474 18-341 1266-1453 7-339 1327-1462 172-341 1210-1411 91-170 172-1412 6-465 1326-1474 9-1470 342-353 671-688 707-725 750-760 873-886 1131-1142 661-709 1ynjD(908-1237) 4e-61 39.64% 4jk1D(917-1147) 6e-27 38.03% 4wqsD(608-941) 5e-56 37.43% 4jk1D(1018-1156) 1e-32 47.14% PF04998(1-168) 2e-45 58.05% PF04998(273-470) 5e-25 36.74% PF05000 5.7e-21 80.3% PF04998 3.2e-33 121.0% 2ghoD1(605-1062) 3e-110 32.35% 2ghoD1(1043-1194) 2e-41 37.91% e.29.1 1.2e-160 544.7%

Sequence

MAERANLVFQNKEIDGTAMKRLISRLIDHFGMGYTSHILDQIKTLGFHQATTTSISLGIE
DLLTIPSKGWLVQDAEQQSFLLEKHYYYGAVHAVEKLRQSVEIWYATSEYLKHEMNSNFR
ITDPSNPVYLMSFSGARGNASQVHQLVGMRGLMADPQGQMIDLPIQSNLREGLSLTEYII
SCYGARKGVVDTAVRTADAGYLTRRLVEVVQHIIVRRRDCGTIQAISVSPQNGMTEKLFV
QTLIGRVLANDIYIGSRCIATRNQDIGIGLVNRFITTFRAQPFRAQPIYIRTPFTCRSTS
WICQLCYGRSSTHGDLVELGEAVGVIAGQSIGEPGTQLTLRTFHTGGVFTGGTADLVRSP
SNGKIQFNGDLVHPTRTRHGQPAFLCYIDLHITIQSQDILHSVTIPSKSLILVQNDQYVE
SEQVIAEIRAGTSALHFKEKVQKHIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLW
ILSVSMCRSSIASFSLHKDQDQMNTYSFSVDGRYIFGLSMADDEVRHRLLDTFGKKDREI
LDYSTPDRIMSNGHWNFVYPSILQNNFDLLAKKRRNRFAIPLQYHQEQEKEPISCFGISI
EIPFMGVLRRNTIVAYFDDPRYKKDKKGSGIVKFRYRTLEDEYRTREKDSENEYGSPENE
YRTREEECKTLEDEYRTREEEYETLEDEYGIPENEYETLEDEYGILEDEYRTREEESEDE
YGSPENKYRPREDKYGTLEEDSEDEHGTLEEDSEEDSEDEYGNPEEDSVLKKGVLIEHRG
TKEFSLKYQKEVDRFFFILQELHILPRSSSLKVLDNSIIGVDTQLTKNTRSRLGGLVRVK
RKKSHTELKIFSGDIHFPEEADKILGGSLIPLEREKKDSKESKKRENWVYVQWKKILKSK
EKYFVLVRPAVAYEMNEGRNLATLFPQDLLQEEGNLQLRLVNFISHENSKLTQRIYHTNS
QFVRTCLVLNWEQEEKEEARASLVEIRANGLIRDFLRIGLIKSTISYTRKRYDSRSAGLI
LHNRLDRTNTNSFYSKAKIQSLSQHQEAIGTLLNRNKEYQSLMVLSASNCSRIGFFKNSK
NPNGVKESNPRIPIPKFWGLFRNFSGLLGTIAPSISNFSSSYYLLTYNQILLKKHLLLDN
LKQNFKVLQGLKHSLINENQRTSNFDSNIMLDPFQLNWHFLPHDSWEETSAKIHLGQFIC
ENVCLFKSHIKKSGQIFIVNIDSFVIRAAKPYLATTGATVHGHYGEILYKGDRLVTFIYE
KARSSDITQGLPKVEQIFEARSIDSLSPNLERRIEDWNERIPRILGGPWGFLIGAELTIA
QSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVFSPGELIGLLRAE
RAGRALDESIYYRAILLGITRVSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKEN
VVLGGIIPVGTGFQKFVHRYPQNKNLYFEIQKKKLFASEMRDILFLHTELVSSDSDVTNN
FYETSESPFTPFI

Region:1-1513
Length:1513aa
Label:Full sequence
Reset:click