Input sequence

Protein name RNA polymerase sigma factor FliA
Organism EColi Length 239
Disorder content 4.6% ProS content 2.9%
IDEAL NA UniProt P0AEM6

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP 0 239 1-153 154-157 158-232 233-239 1-153 158-232 154-157 233-239 233-239 11-236 11-237 16-86 16-89 90-172 185-234 16-126 91-163 146-236 2-88 89-163 147-238 1rp3A(10-233) 1e-33 36.56% 1rp3A(10-234) 1e-42 35.96% PF04542(1-68) 2e-05 38.03% PF04542 3.6e-19 74.3% PF04539 1e-22 86.0% PF04545 8.6e-19 73.0% 1aw8.1(5-114) 8e-21 17.12% 1rp3A1(3-75) 3e-09 27.4% 1iw7F2(4-89) 2e-06 26.37% a.177.1 7.7e-23 83.0% a.4.13 4.2e-18 61.3% a.4.13 7.6e-19 68.2%

Sequence

MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV
AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ
RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL

Region:1-239
Length:239aa
Label:Full sequence
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