Input sequence

Protein name Sodium channel protein type 3 subunit alpha
Organism Rattus norvegicus Length 1951
Disorder content 24.1% ProS content 18.5%
IDEAL NA UniProt P08104

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1951 1-4 5-27 28-67 68-465 466-665 666-942 943-950 951-981 982-1114 1115-1821 1822-1835 1836-1880 1881-1951 5-27 68-465 666-942 951-981 1115-1821 1836-1880 1-4 28-67 466-665 943-950 982-1114 1822-1835 1881-1951 1-4 28-42 48-67 466-481 492-500 527-586 591-630 639-665 992-1031 1042-1099 1822-1835 1881-1907 1917-1934 1940-1951 1734-1875 1432-1452 156-176 1726-1878 1432-1452 156-176 1195-1418 157-321 1512-1662 745-922 352-423 951-1167 524-633 156-423 745-934 947-1167 1193-1418 1511-1721 1472-1561 707-792 1153-1239 170-270 1525-1602 115-432 678-964 1137-1427 1461-1749 23-40 432-469 473-498 500-509 798-810 838-850 923-945 1020-1031 1063-1085 1253-1268 1574-1586 1696-1714 1912-1920 1926-1942 424-465 125-147 192-214 221-243 247-269 402-424 707-729 742-764 829-851 912-934 1157-1176 1197-1219 1229-1251 1278-1300 1397-1419 1478-1497 1507-1529 1536-1558 1609-1631 1699-1721 4jpzB(1-142) 2e-70 92.96% 1byyA(1-21) 8e-05 100.0% 1qg9A(1-21) 0.0002 100.0% 4dckA(1-153) 4e-49 75.82% 1byyA(1-21) 5e-06 100.0% 1qg9A(1-21) 0.0002 100.0% PF00520(3-198) 5e-36 42.86% PF00520(2-166) 1e-21 35.67% PF00520(2-160) 6e-18 41.36% PF00520(1-186) 3e-14 38.5% PF00520(128-198) 8e-11 44.44% PF06512(3-219) 5e-24 39.83% PF11933(39-135) 8e-14 42.73% PF00520 1e-73 255.5% PF00520 1.9e-62 218.1% PF06512 4.1e-125 426.2% PF00520 1.2e-73 255.2% PF00520 3.1e-64 224.0% 1orsC(1-91) 6e-19 7.69% 1orsC(2-87) 1e-13 10.34% 1orsC(2-86) 2e-10 12.64% 2e9xC1(1-103) 1e-13 12.39% 2e9xC1(1-82) 2e-06 14.63% f.14.1 1.2e-30 106.4% f.14.1 2.9e-31 108.6% f.14.1 1.9e-38 133.5% f.14.1 1e-35 124.1%

Sequence

MAQALLVPPGPESFRLFTRESLAAIEKRAAEEKAKKPKKEQDIDDENKPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYVSKKTFVVLNKGKAIFRFSATSALYILTPLNPVRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCL
EDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCSQWPPSDSAFETNTTSYFNGTMD
SNGTFVNVTMSTFNWKDYIADDSHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAVAAASAASRDFSGIGGLGE
LLESSSEASKLSSKSAKEWRNRRKKRRQREHLEGNHRADGDRFPKSESEDSVKRRSFLLS
LDGNPLTGDKKLCSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDVGSENDFADDEHST
FEDSESRRDSLFVPHRPGERRNSNGTTTETEVRKRRLSSYQISMEMLEDSSGRQRSMSIA
SILTNTMEELEESRQKCPPCWYRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITIC
IVLNTLFMAMEHYPMTQQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDG
IIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKSYKECVCKINVDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMW
DCMEVAGQTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVG
RMQKGIDFVKNKIRECFRKAFFRKPKVIEIQEGNKIDSCMSNNTGIEISKELNYLKDGNG
TTSGVGTGSSVEKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEES
KEKLNATSSSEGSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPFCQVSTEEGKG
KIWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTY
IFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRAL
RPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTT
GNMFEIKEVNNFSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDS
RDVKLQPIYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDD
QSKYMTLVLSRINLVFIVLFTGEFLLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAEL
IEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
AIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPD
AIHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDD
FEMFYEVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHC
LDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQEEVSAAIIQR
NYRCYLLKQRLKNISSKYDKETIKGRIDLPIKGDMVIDKLNGNSTPEKTDGSSSTTSPPS
YDSVTKPDKEKFEKDKPEKEIKGKEVRENQK

Region:1-1951
Length:1951aa
Label:Full sequence
Reset:click