Input sequence

Protein name HLA class II histocompatibility antigen, DO alpha chain
Organism Homo sapiens Length 250
Disorder content 10.0% ProS content 8.4%
IDEAL NA UniProt P06340

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP TMHMM:TMhelix 0 250 1-23 24-248 249-250 24-248 1-23 249-250 5-23 249-250 27-207 27-207 30-108 131-199 29-110 119-201 120-212 30-106 29-112 106-224 226-248 4i0pC(1-181) 5e-106 100.0% 4i0pC(1-181) 1e-57 100.0% PF00993(2-79) 1e-21 59.49% PF07654(13-81) 2e-05 34.78% PF00993 2.6e-45 161.1% PF07654 4.4e-37 133.8% 1d2oA1(2-90) 4e-20 9.68% 1a6aA2(1-76) 7e-16 46.75% d.19.1 1.2e-29 100.3% b.1.1 3.3e-27 83.7%

Sequence

MALRAGLVLGFHTLMTLLSPQEAGATKADHMGSYGPAFYQSYGASGQFTHEFDEEQLFSV
DLKKSEAVWRLPEFGDFARFDPQGGLAGIAAIKAHLDILVERSNRSRAINVPPRVTVLPK
SRVELGQPNILICIVDNIFPPVINITWLRNGQTVTEGVAQTSFYSQPDHLFRKFHYLPFV
PSAEDVYDCQVEHWGLDAPLLRHWELQVPIPPPDAMETLVCALGLAIGLVGFLVGTVLII
MGTYVSSVPR

Region:1-250
Length:250aa
Label:Full sequence
Reset:click