Input sequence

Protein name Collagen alpha-1(II) chain
Organism Rattus norvegicus Length 1419
Disorder content 83.4% ProS content 81.3%
IDEAL NA UniProt P05539

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1419 1-1183 1184-1419 1184-1419 1-1183 1-110 137-1157 1162-1183 1204-1419 459-547 1024-1051 1204-1419 1201-1418 48-107 131-189 190-249 250-309 310-369 370-429 430-489 490-549 550-609 610-669 670-729 733-792 793-852 853-912 913-972 973-1032 1033-1092 1093-1152 1201-1418 1162-1362 1211-1254 10-21 40-64 84-109 123-199 241-257 262-307 327-343 348-383 403-445 511-532 553-565 568-587 591-619 628-685 715-736 747-784 786-817 820-866 879-907 949-964 970-985 994-1013 1068-1149 1270-1277 4ae2A(1-212) 3e-93 69.91% 2pneA(2-79) 0.0005 38.2% 2klwA(3-30) 0.001 57.14% 4ae2A(1-212) 8e-61 69.91% PF01410(1-209) 5e-86 72.48% PF01391 1.2e-10 46.0% PF01391 2.8e-10 44.8% PF01391 4.9e-18 70.5% PF01391 2.3e-14 58.3% PF01391 1.3e-12 52.5% PF01391 3e-15 61.3% PF01391 4.5e-12 50.7% PF01391 2.8e-15 61.4% PF01391 4.9e-16 63.9% PF01391 6.9e-13 53.4% PF01391 1.6e-16 65.5% PF01391 1.6e-16 65.5% PF01391 5.5e-14 57.1% PF01391 5.7e-12 50.4% PF01391 5.6e-13 53.7% PF01391 4.2e-13 54.1% PF01391 1.1e-15 62.8% PF01391 6.8e-07 33.5% PF01410 8.6e-168 568.0% 1j83A(7-179) 1e-41 8.78% d.171.1 0.00026 12.0%

Sequence

MIRLGAPQSLVLLTLLIATVLQCQGQDARKLGPKGQKGEPGDIKDIIGPKGPPGPQGPAG
EQGPRGDRGDKGERGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGGNFAAQMAGGFD
EKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPIGPRGPPGPA
GKPGDDGEAGKPGKAGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVK
GESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFL
GAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGPAGASGNPGTDGIPGAKGSAGAPGIA
GAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEE
GKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDP
GRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPK
GANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPSGPAGERGEQGAPGPSGFQGLP
GPPGPPGEGGKQGDQGIPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTD
GPKGAAGPDGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLT
GPIGPPGPAGANGEKGEVGPPGPSGSTGARGAPGERGETGPPGPAGFAGPPGADGQPGAK
GDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPP
GSNGNPGPAGPPGPAGKDGPKGARGDTGAPGRAGDPGLQGPAGAPGEKGEPGDDGPSGSD
GPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLT
GPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDR
GEAGAQGPMGPSGPAGARGIAGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPS
GDQGTSGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPAGPPGNPGPP
GPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADEADSTLRQHDVEVDATLKSLNNQIES
IRSPDGSRKNPARTCQDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGESCVYPNP
ATVPRKNWWSSKSKEKKHIWFGETMNGGFHFSYGDGNLAPNTANVQMTFLRLLSTEGSQN
ITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEMRAEGNSRFTYTALKDGCTKHTGKWGKT
IIEYRSQKTSRLPIVDIAPMDIGGPDQEFGVDIGPVCFL

Region:1-1419
Length:1419aa
Label:Full sequence
Reset:click