Input sequence

Protein name HLA class II histocompatibility antigen, DQ beta 2 chain
Organism Homo sapiens Length 268
Disorder content 5.2% ProS content 3.7%
IDEAL NA UniProt P05538

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 268 1-6 7-135 136-141 142-260 261-268 7-135 142-260 1-6 261-268 5-6 261-268 36-223 20-220 45-114 140-214 45-118 134-216 3-153 129-219 6-124 121-242 231-250 7-29 231-250 1jk8B(2-190) 5e-89 82.01% 1e6oL(3-208) 8e-49 13.11% PF00969(1-71) 2e-25 73.24% PF07654(7-81) 1e-08 42.67% PF00969 1.5e-33 122.1% PF07654 5.7e-44 156.7% 1fyzC(129-282) 2e-24 6.41% 1d2oA1(2-82) 2e-18 9.89% d.19.1 1.8e-40 133.0% b.1.1 4.4e-30 92.6%

Sequence

MSWKMALQIPGGFWAAAVTVMLVMLSTPVAEARDFPKDFLVQFKGMCYFTNGTERVRGVA
RYIYNREEYGRFDSDVGEFQAVTELGRSIEDWNNYKDFLEQERAAVDKVCRHNYEAELRT
TLQRQVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETAGVVSTSLIR
NGDWTFQILVMLEITPQRGDIYTCQVEHPSLQSPITVEWRAQSESAQSKMLSGIGGFVLG
LIFLGLGLIIRHRGQKGPRGPPPAGLLH

Region:1-268
Length:268aa
Label:Full sequence
Reset:click