Input sequence

Protein name HLA class II histocompatibility antigen, DQ beta 1 chain
Organism Homo sapiens Length 261
Disorder content 12.6% ProS content 11.1%
IDEAL NA UniProt P01920

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 261 1-27 28-136 137-142 143-255 256-261 28-136 143-255 1-27 256-261 5-27 256-261 35-224 21-221 47-115 141-215 45-119 135-217 3-154 130-220 6-125 128-223 232-251 231-253 1jk8B(1-190) 2e-107 96.84% 1e6oL(4-208) 8e-49 11.22% PF00969(3-71) 1e-26 71.01% PF07654(7-81) 5e-09 44.0% PF00969 3.8e-38 137.3% PF07654 5.3e-44 156.8% 1fyzC(129-282) 3e-25 8.33% 1d2oA1(2-82) 3e-16 10.99% d.19.1 2.7e-46 152.2% b.1.1 3e-30 104.5%

Sequence

MSWKKALRIPGGLRAATVTLMLAMLSTPVAEGRDSPEDFVYQFKAMCYFTNGTERVRYVT
RYIYNREEYARFDSDVEVYRAVTPLGPPDAEYWNSQKEVLERTRAELDTVCRHNYQLELR
TTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLI
RNGDWTFQILVMLEMTPQHGDVYTCHVEHPSLQNPITVEWRAQSESAQSKMLSGIGGFVL
GLIFLGLGLIIHHRSQKGLLH

Region:1-261
Length:261aa
Label:Full sequence
Reset:click