Input sequence

Protein name Slit homolog 1 protein
Organism Rattus norvegicus Length 1531
Disorder content 2.9% ProS content 1.6%
IDEAL NA UniProt O88279

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1531 1-16 17-267 268-279 280-1354 1355-1367 1368-1369 1370-1373 1374-1531 17-267 280-1354 1368-1369 1374-1531 1-16 268-279 1355-1367 1370-1373 9-16 1355-1367 1370-1373 282-487 512-721 734-914 34-267 926-1109 1336-1451 1158-1371 1069-1160 279-487 512-721 734-914 34-232 931-1047 1005-1120 1149-1336 1165-1442 138-365 1087-1161 398-602 1193-1322 33-60 239-264 281-308 512-539 695-720 733-760 890-915 929-961 968-1002 1009-1040 1047-1080 1087-1118 1128-1159 1191-1319 1339-1370 1378-1409 1419-1450 282-668 34-262 1148-1336 934-1113 517-826 809-898 1080-1159 197-364 33-265 281-500 515-878 921-968 965-1005 1145-1337 1331-1375 1377-1413 1416-1455 18-33 110-122 186-196 380-388 792-808 831-839 2v9tB(5-210) 5e-95 83.5% 2v70A(1-210) 7e-87 69.05% 2wfhA(1-181) 3e-64 74.59% 1w8aA(2-188) 2e-31 33.19% 4xbmB(220-397) 2e-33 37.63% 4xbmB(220-330) 9e-15 35.59% 3qcwA(184-413) 4e-13 24.37% 2m74A(58-136) 2e-07 34.78% 2v9tB(2-210) 1e-66 82.78% 2v70A(1-210) 8e-55 69.05% 2wfhA(1-181) 4e-44 74.59% 3m18A(2-205) 2e-39 36.27% 4cudA(9-121) 3e-30 37.61% 4cudA(1-116) 1e-28 36.44% 1pz7A(1-188) 3e-21 12.57% 3asiA(4-276) 8e-11 13.17% 1xwdC(13-233) 1e-07 13.97% 3k9xA(1-70) 0.0001 29.33% 4xa9A(36-247) 9e-06 13.21% PF00054(3-132) 6e-15 41.18% PF01462 6.3e-10 43.6% PF01463 2.3e-05 28.4% PF01462 1.3e-08 39.2% PF01462 2.5e-08 38.3% PF01463 0.00037 24.4% PF01462 2.8e-07 34.8% PF01463 0.00016 25.7% PF00008 4.7e-09 40.7% PF00008 1.4e-07 35.7% PF00008 8e-07 33.3% PF00008 9.8e-09 39.6% PF00008 1.3e-09 42.5% PF00008 0.00025 25.0% PF02210 1.3e-38 138.8% PF00008 1.7e-05 28.8% PF00008 4.2e-05 27.6% PF00008 0.00052 23.9% 1xcdA(4-305) 1e-25 21.77% 1oznA(2-282) 1e-23 26.33% 1pz7A(3-188) 7e-23 17.1% 1wc2A1(10-180) 1e-19 10.5% 1ogqA(34-309) 3e-15 10.58% 1igrA2(48-156) 0.0001 10.09% 1jk4A(3-79) 9e-06 16.25% 1io0A(9-163) 4e-05 10.12% c.10.2 1.2e-56 199.2% c.10.2 2.6e-48 171.2% c.10.2 7.6e-57 179.1% g.3.11 2.9e-12 40.3% g.3.11 1.2e-07 26.6% b.29.1 2.8e-58 142.6% g.3.11 1.1e-06 24.0% g.3.11 2.6e-05 19.1% g.3.11 8.5e-06 20.7%

Sequence

MALTPQRGSSSGLSRPELWLLLWAAAWRLGATACPALCTCTGTTVDCHGTGLQAIPKNIP
RNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQ
LQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL
RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPASLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGL
TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSGLKLSKIPERIPQ
STTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQ
LESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTL
QALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE
EGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH
GNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPEME
GKLLLTTPAKKFECQGPPSLAVQAKCDPCLSSPCQNQGTCHNDPLEVYRCTCPSGYKGRN
CEVSLDSCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGLTCGMNTDDCVKHDCVNGGVC
VDGIGNYTCQCPLQYTGRACEQLVDFCSPDLNPCQHEAQCVGTPEGPRCECVPGYTGDNC
SKNQDDCKDHQCQNGAQCVDEINSYACLCAEGYSGQLCEIPPAPRNSCEGTECQNGANCV
DQGSRPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL
LYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNLSID
GGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYINNEL
QDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPVDGPCHG
HKCVHGKCVPLDALAYSCQCQDGYSGALCNQVGAVAEPCGGLQCLHGHCQASATRGAHCV
CSPGFSGELCEQESECRGDPVRDFHRVQRGYAICQTTRPLSWVECRGACPGQGCCQGLRL
KRRKLTFECSDGTSFAEEVEKPTKCGCAPCA

Region:1-1531
Length:1531aa
Label:Full sequence
Reset:click