Input sequence

Protein name Collagen alpha-1(V) chain
Organism Mus musculus Length 1838
Disorder content 75.3% ProS content 69.5%
IDEAL NA UniProt O88207

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1838 1-12 13-30 31-35 36-245 246-1608 1609-1691 1692-1695 1696-1838 13-30 36-245 1609-1691 1696-1838 1-12 31-35 246-1608 1692-1695 1-12 246-284 289-293 299-314 325-357 385-424 442-530 557-1577 1590-1608 1692-1695 1628-1837 68-208 1628-1837 41-242 1625-1836 106-229 469-528 554-612 613-672 673-732 733-792 793-852 853-912 913-972 973-1032 1033-1092 1096-1155 1156-1215 1216-1275 1276-1335 1336-1395 1396-1455 1456-1515 1516-1575 1625-1836 1598-1783 41-231 57-245 1623-1682 9-34 259-288 300-314 335-352 374-387 412-428 460-523 545-558 562-586 589-619 643-698 712-757 760-793 826-862 895-925 949-979 984-1033 1075-1117 1134-1165 1174-1193 1215-1243 1249-1282 1285-1421 1450-1480 1485-1495 1521-1570 13-30 4ae2A(1-212) 1e-41 42.2% 2uurA(34-175) 2e-09 27.89% 4ae2A(1-212) 9e-44 41.4% 2uurA(12-210) 8e-23 22.97% PF01410(1-209) 8e-60 54.17% PF02210 2.1e-13 55.1% PF01391 1.4e-05 22.8% PF01391 5.9e-06 30.0% PF01391 6.2e-15 60.2% PF01391 4.2e-15 60.8% PF01391 1e-09 42.8% PF01391 3.7e-08 37.7% PF01391 1.5e-09 42.3% PF01391 7.6e-15 59.9% PF01391 1e-13 56.1% PF01391 3.9e-12 50.9% PF01391 4.7e-12 50.6% PF01391 2.5e-08 38.3% PF01391 9.2e-10 43.0% PF01391 2.5e-10 44.9% PF01391 6.9e-11 46.8% PF01391 1.9e-10 45.3% PF01391 1.2e-11 49.3% PF01391 7.2e-10 43.4% PF01410 6.6e-142 482.0% 1j83A(9-180) 6e-45 16.67% 1z78A1(5-195) 3e-23 15.92% b.29.1 6.9e-34 82.2% d.171.1 0.0005 12.1%

Sequence

MDVHTRWKAARPGALLLSSPLLLFLLLLWAPPSSRAAQPADLLEMLDFHNLPSGVTKTTG
FCATRRSSSEPDVAYRVSKDAQLSMPTKQLYPESGFPEDFSILTTVKAKKGSQAFLVSIY
NEQGIQQLGLELGRSPVFLYEDHTGKPGPEEYPLFPGINLSDGKWHRIALSVYKKNVTLI
LDCKKKITKFLSRSDHPIIDTNGIVMFGSRILDDEIFEGDIQQLLFVSDNRAAYDYCEHY
SPDCDTAVPDTPQSQDPNPDEYYPEGEGETYYYEYPYYEDPEDPGKEPAPTQKPVEAARE
TTEVPEEQTQPLPEAPTVPETSDTADKEDSLGIGDYDYVPPDDYYTPPPYEDFGYGEGVE
NPDQPTNPDSGAEVPTSTTVTSNTSNPAPGEGKDDLGGEFTEETIKNLEENYYDPYFDPD
SDSSVSPSEIGPGMPANQDTIFEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP
GPPGTTGPTGQMGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS
AQESQAQAILQQARLALRGPAGPMGLTGRPGPMGPPGSGGLKGEPGDMGPQGPRGVQGPP
GPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGIPGDD
GERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPP
GQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPP
GPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGED
GPEGPKGRGGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGR
GTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFP
GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPP
GPPGEQGLPGAAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGSEGPP
GPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGLPGEKGPQGPAGRDGLQGPV
GLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEP
GPRGQQGLFGQKGDEGSRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPS
GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGDPGLPGEGGPLGPKGERGEKGEAGPSGAA
GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPT
GEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLR
GIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK
GDRGLPGPQGSSGPKGDQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHP
GLPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGAGESYVDYADGMEEIFGSLNSLKL
EIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTC
VFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQ
NVTYNCYQSVAWQDAATGSYDKAIRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVL
EIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFLG

Region:1-1838
Length:1838aa
Label:Full sequence
Reset:click