Input sequence

Protein name Cyclic nucleotide-gated ion channel 1
Organism Arabidopsis thaliana Length 716
Disorder content 21.6% ProS content 15.6%
IDEAL NA UniProt O65717

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 716 1-77 78-638 639-716 78-638 1-77 639-716 1-18 23-50 58-77 639-652 669-687 704-716 483-604 420-537 475-604 435-474 138-403 504-604 420-615 347-409 90-169 86-423 411-619 638-649 691-702 98-119 145-167 188-210 258-280 378-400 1wgpA(10-131) 5e-48 73.77% 1q3eA(10-126) 6e-11 30.51% 1wgpA(2-131) 3e-37 69.23% 1abzA(1-38) 2e-05 22.5% PF00520 6e-17 66.9% PF00027 1.3e-08 39.2% 1q3eA(10-188) 2e-25 24.49% 1bl8A(32-94) 3e-07 17.46% 1d5rA1(26-102) 1e-06 12.2% f.14.1 7.2e-33 114.2% b.82.3 2e-40 140.8%

Sequence

MNFRQEKFVRFQDWKSDKTSSDVEYSGKNEIQTGIFQRTISSISDKFYRSFESSSARIKL
FKRSYKSYSFKEAVSKGIGSTHKILDPQGPFLQRWNKIFVLACIIAVSLDPLFFYVPIID
DAKKCLGIDKKMEITASVLRSFTDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIA
KRYLSSHFIIDILAVLPLPQMVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRIYPL
YKEVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPC
ISKLLYCDPETAGGNAFLNESCPIQTPNTTLFDFGIFLDALQSGVVESQDFPQKFFYCFW
WGLQNLSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVK
RRDAEQWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLAL
LMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGR
TGFLNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVAS
QFRRLHSKQLRHTFRYYSQQWKTWAACFIQAAWRRYIKKKLEESLKEEENRLQDALAKEA
CGSSPSLGATIYASRFAANILRTIRRSGSVRKPRMPERMPPMLLQKPAEPDFNSDD

Region:1-716
Length:716aa
Label:Full sequence
Reset:click