Input sequence

Protein name Pentatricopeptide repeat-containing protein At2g18940, chloroplastic
Organism Arabidopsis thaliana Length 822
Disorder content 10.6% ProS content 4.6%
IDEAL NA UniProt O64624

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 822 1-87 88-822 88-822 1-87 1-11 45-57 74-87 114-806 113-806 703-732 211-245 282-316 317-351 352-386 387-421 422-456 457-491 492-526 527-561 632-666 667-701 702-736 737-771 772-806 215-425 355-564 495-741 705-802 139-252 183-552 563-803 22-33 36-66 101-112 4m57A(14-671) 0.0 52.74% 4m57A(13-671) 2e-125 48.06% PF01535(1-30) 0.0008 50.0% PF01535 4.6e-10 44.0% PF01535 2.9e-07 34.7% PF01535 7.3e-09 40.1% PF01535 1.6e-07 35.6% PF01535 2e-13 55.2% PF01535 1.6e-07 35.6% PF01535 2.1e-07 35.2% PF01535 5.9e-06 30.4% PF01535 5.2e-09 40.5% PF01535 4e-07 34.3% PF01535 4.1e-08 37.6% PF01535 5e-12 50.6% PF01535 2.6e-06 31.6% PF01535 0.00028 24.8% 2fsqA1(3-208) 6e-33 5.61% 2fsqA1(2-207) 1e-27 7.51% 2fsqA1(2-209) 2e-23 5.26% 1nnvA(2-98) 6e-13 10.1% 1nnvA(1-105) 2e-07 13.91% a.118.8 2.1e-21 73.1% a.118.8 2.8e-12 41.0%

Sequence

MDGALFPHKPPYPIQSKRPPPSQSSNQSIKFSSATLHLPPPSPPSFPLDSLLHHLVHLSS
PPPRHSNSAAARFPSLEVSTDSSSSKPILGIEIENERNGSLKLLCKKEVVLVNSIVEQPL
TGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEI
FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG
PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA
KEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAA
YVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN
TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR
EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG
DWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLR
TLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED
GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEA
VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDG
YCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALRVRENLES

Region:1-822
Length:822aa
Label:Full sequence
Reset:click