Input sequence

Protein name Protocadherin-12
Organism Mus musculus Length 1180
Disorder content 32.5% ProS content 22.6%
IDEAL NA UniProt O55134

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1180 1-18 19-587 588-603 604-611 612-706 707-715 716-738 739-748 749-786 787-977 978-983 984-1029 1030-1066 1067-1070 1071-1079 1080-1115 1116-1126 1127-1180 19-587 612-706 716-738 749-786 978-983 1030-1066 1071-1079 1116-1126 1-18 588-603 707-715 739-748 787-977 984-1029 1067-1070 1080-1115 1127-1180 1-18 588-603 707-715 739-748 787-806 816-833 843-854 861-867 916-977 984-1007 1016-1029 1067-1070 1087-1094 1105-1115 1127-1154 1175-1180 195-566 32-139 180-693 32-236 32-111 467-556 249-343 611-693 30-114 140-235 249-343 359-451 465-556 200-652 35-317 620-696 22-128 129-236 238-344 346-452 454-557 559-697 3-15 166-177 716-737 960-975 1032-1041 1115-1125 716-738 3q2wA(59-447) 3e-27 30.38% 1wyjA(13-119) 3e-12 35.19% 3q2wA(51-538) 7e-64 24.12% 2wcpA(16-206) 7e-19 23.0% PF08266(3-81) 2e-08 33.75% PF00028(3-92) 1e-07 41.11% PF00028(1-92) 6e-07 35.79% PF00028(8-89) 5e-05 38.37% PF08266 1.4e-09 40.0% PF00028 2.5e-10 44.9% PF00028 1.7e-20 78.7% PF00028 1.1e-13 56.1% PF00028 3.4e-19 74.4% 1dnvA(14-411) 2e-54 7.36% 2nlzA1(266-531) 2e-20 10.88% 1l3wA5(23-99) 9e-08 12.99% b.1.6 3.7e-06 23.8% b.1.6 1e-23 82.9% b.1.6 5.9e-28 97.5% b.1.6 2.7e-23 81.5% b.1.6 2.4e-28 98.8% b.1.6 4.8e-10 36.4%

Sequence

MMLLLPFLLGLLGPGSYLFISGDCQEVATVMVKFQVTEEVPSGTVIGKLSQELRVEERRG
KAGDAFQILQLPQALPVQMNSEDGLLSTSSRLDREKLCRQEDPCLVSFDVLATGASALIH
VEIQVLDINDHQPQFPKDEQELEISESASLHTRIPLDRALDQDTGPNSLYSYSLSPSEHF
ALDVIVGPDETKHAELVVVKELDRELHSYFDLVLTAYDNGNPPKSGISVVKVNVLDSNDN
SPVFAESSLALEIPEDTVPGTLLINLTATDPDQGPNGEVEFFFGKHVSPEVMNTFGIDAK
TGQIILRQALDYEKNPAYEVDVQARDLGPNSIPGHCKVLIKVLDVNDNAPSILITWASQT
SLVSEDLPRDSFIALVSANDLDSGNNGLVHCWLNQELGHFRLKRTNGNTYMLLTNATLDR
EQWPIYTLTVFAQDQGPQPLSAEKELQIQVSDVNDNAPVFEKSRYEVSTWENNPPSLHLI
TLKAHDADLGSNGKVSYRIKDSPVSHLVIIDFETGEVTAQRSLDYEQMAGFEFQVIAEDR
GQPQLASSISVWVSLLDANDNAPEVIQPVLSEGKATLSVLVNASTGHLLLPIENPSGMDP
AGTGIPPKATHSPWSFLLLTIVARDADSGANGELFYSIQSGNDAHLFFLSPSLGQLFINV
TNASSLIGSQWDLGIVVEDQGSPSLQTQVSLKVVFVTSVDHLRDSAHEPGVLSTPALALI
CLAVLLAIFGLLLALFVSICRTERKDNRAYNCREAESSYRHQPKRPQKHIQKADIHLVPV
LRAHENETDEVRPSHKDTSKETLMEAGWDSCLQAPFHLTPTLYRTLRNQGNQGELAESQE
VLQDTFNFLFNHPRQRNASRENLNLPESPPAVRQPLLRPLKVPGSPIARATGDQDKEEAP
QSPPASSATLRRQRNFNGKVSPRGESGPHQILRSLVRLSVAAFAERNPVEEPAGDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPGGSSRGTIPDTEGLVGLKPSGQAEPDLEEGP
PSPEEDLSVKRLLEEELSSLLDPNTGLALDKLSPPDPAWMARLSLPLTTNYRDNLSSPDA
TTSEEPRTFQTFGKTVGPGPELSPTGTRLASTFVSEMSSLLEMLLGQHTVPVEAASAALR
RLSVCGRTLSLDLATSGASASEAQGRKKAAESRLGCGRNL

Region:1-1180
Length:1180aa
Label:Full sequence
Reset:click