Input sequence

Protein name Voltage-dependent N-type calcium channel subunit alpha-1B
Organism Mus musculus Length 2327
Disorder content 40.7% ProS content 21.8%
IDEAL NA UniProt O55017

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2327 1-66 67-399 400-400 401-458 459-753 754-1109 1110-1861 1862-2327 67-399 459-753 1110-1861 1-66 401-458 754-1109 1862-2327 1-15 56-65 401-416 425-454 754-782 803-817 823-829 836-848 856-872 879-896 923-927 959-1017 1025-1092 1880-1886 1910-1916 1925-1933 1953-1960 1971-1998 2022-2029 2055-2080 2088-2092 2100-2105 2118-2123 2130-2146 2158-2179 2240-2258 2264-2277 2295-2305 2315-2327 363-407 1235-1262 1842-1863 363-407 1700-1794 1784-1859 1235-1262 1175-1370 137-355 1499-1698 518-707 132-355 516-708 1174-1408 1498-1698 1460-1547 1135-1266 478-588 91-219 1512-1588 32-364 475-717 1132-1417 1463-1702 9-40 226-242 593-605 608-626 728-739 849-858 903-913 916-933 1091-1102 1387-1405 1555-1571 2040-2050 2092-2114 2276-2292 705-745 96-115 135-157 164-183 223-245 291-313 333-355 482-504 514-536 609-631 687-709 1136-1158 1178-1200 1207-1229 1275-1297 1344-1363 1388-1410 1460-1482 1502-1524 1531-1553 1595-1617 1676-1698 4dexB(1-45) 2e-18 100.0% 2lcmA(1-28) 1e-07 100.0% 3dveB(2-23) 0.0002 90.91% 4dexB(1-45) 1e-17 100.0% 2kavA(1-90) 8e-16 25.0% 3g43E(2-66) 4e-10 36.84% 2lcmA(1-28) 2e-05 100.0% PF00520(2-170) 4e-28 38.07% PF00520(6-198) 1e-27 38.67% PF00520(2-198) 8e-23 32.54% PF00520(3-197) 6e-18 35.0% PF00520 2.7e-70 244.1% PF00520 4.5e-59 206.9% PF00520 4.3e-67 233.5% PF00520 2.1e-70 244.5% 1orsC(2-89) 1e-14 10.11% 1orsC(2-124) 5e-12 16.54% 1orsC(2-108) 6e-12 14.29% 1orsC(2-125) 2e-08 16.79% 2e9xC1(1-84) 2e-07 14.29% f.14.1 5.8e-33 114.5% f.14.1 1.1e-33 117.0% f.14.1 6.2e-29 100.5% f.14.1 1.4e-31 109.6%

Sequence

MVRFGDELGGRYGGTGGGERARGGGAGGAGGPGQGGLPPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNSTDTEPVGDFPCGKDPPARQCDGDTECREYWPGPNFGITNFDNI
LFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAA
TKKSRNDLIHAEEGEDRFVDLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMVK
AQSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRS
YFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVV
SLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQIL
TGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVWEQRASQLRLQNL
RASCEALYSEMDPEERLRYASTRHVRPDMKTHMDRPLVVEPGRDGLRGPVGSKSKPEGTE
ATESADLPRRHHRHRDRDKTSATAPAGGEQDRTESTETGAREERARPRRSHSKETPGADT
QVRCERSRRHHRRGSPEEATEREPRRHRAHRHAQDSSKEGTAPVLVPKGERRARHRGPRT
GPREAENNEEPTRRHRARHKVPPTLQPPEREAAEKESNAVEGDKETRNHQPKEPHCDLEA
IAVTGVGPLHMLPSTCLQKVDEQPEDADNQRNVTRMGSQPSDPSTTVHVPVTLTGPPGET
PVVPSGNMNLEGQAEGKKEAEADDVLRRGPRPIVPYSSMFCLSPTNLLRRFCHYIVTMRY
FEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHP
GAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDINTIKSLRVLRVLRPLKTIKRLPK
LKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQYL
DYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPG
FRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAK
PLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLN
IVFTSMFSMECILKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIANNFINLSFLRL
FRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDD
TSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLGNRACDPHANASECGSDFAYFYFV
SFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDM
FEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIRTALEIKLAP
AGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT
TRDQTHQAPGGLSQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSATSLSNGGAIQTQ
ESGIKESLSWGTQRTQDALYEARAPLERGHSAEIPVGQSGTLAVDVQMQNMTLRGPDGEP
QPGLESQGRAASMPRLAAETQPAPNASPMKRSISTLAPRPHGTQLCSTVLDRPPPSQASH
HHHHRCHRRRDKKQRSLEKGPSLSVDPEGAPSTAAGPGLPHGEGSTACRRDRKQERGRSQ
ERRQPSSSSSEKQRFYSCDRFGSREPPQLMPSLSSHPTSPTAALEPAPHPQGSGSVNGSP
LMSTSGASTPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAEGQSGLPAFSPGRLSRGL
SEHNALLQKEPLSQPLAPGSRIGSDPYLGQRLDSEASAHTLPEDTLTFEEAVATNSGRSS
RTSYVSSLTSQSHPLRRVPNGYHCTLGLSTGVRARHSYHHPDQDHWC

Region:1-2327
Length:2327aa
Label:Full sequence
Reset:click