Input sequence

Protein name DNA-directed RNA polymerase I subunit RPA1
Organism Rattus norvegicus Length 1716
Disorder content 10.2% ProS content 4.7%
IDEAL NA UniProt O54889

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1716 1-5 6-150 151-157 158-208 209-259 260-291 292-296 297-354 355-357 358-376 377-414 415-419 420-529 530-538 539-727 728-734 735-843 844-847 848-986 987-991 992-1376 1377-1416 1417-1454 1455-1491 1492-1716 6-150 158-208 260-291 297-354 377-414 420-529 539-727 735-843 848-986 992-1376 1417-1454 1492-1716 1-5 151-157 209-259 358-376 530-538 728-734 1377-1416 1455-1491 151-157 209-238 358-362 370-376 728-734 1377-1385 1403-1416 1491-1491 12-1386 1497-1694 10-1382 1482-1715 441-618 626-809 15-139 1210-1322 965-1039 880-957 9-439 441-621 624-809 850-958 965-1668 296-1032 1492-1711 8-110 1206-1306 994-1086 6-1711 240-251 1191-1205 1388-1406 1409-1421 1425-1452 1467-1478 1697-1707 1417-1454 4c2mA(11-1268) 0.0 38.44% 4c2mA(1303-1496) 4e-30 36.36% 4c2mA(9-1264) 0.0 37.87% 4c2mA(1288-1517) 6e-50 34.62% PF00623(1-163) 6e-41 49.44% PF04983(3-145) 1e-21 36.96% PF04997(5-127) 4e-17 37.6% PF04998(142-256) 2e-15 40.52% PF04998(1-75) 9e-13 45.33% PF05000(36-106) 3e-09 37.18% PF04997 2.6e-06 -94.6% PF00623 5.7e-103 352.7% PF04983 1.3e-62 218.6% PF05000 1.5e-28 105.5% PF04998 7.5e-160 541.6% 1i3qA(225-873) 4e-173 30.51% 1i3qA(1189-1412) 4e-36 23.58% 1i3qA(9-112) 2e-30 33.65% 1i3qA(1051-1141) 2e-18 41.18% 1m4zA(29-130) 1e-08 6.86% e.29.1 0.0 1266.8%

Sequence

MLASKHTPWRRLQGISFGMYSAEELKKLSVKSITNPRYVDSLGNPSADGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAAIHLL
VCQLKVLDVGALQAVYELERILSRFLEETSDPSAFEIQEELEEYTSKILQNNLLGSQGAH
VKNVCESRSKLVAHFWKTHMAAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHKKSGQKDA
ELPEGAPAAPGIDEAQMGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDIGPESSFN
PSMFFLDFIVVPPSRYRPINRLGDQMFTNGQTVNLQAVMKDAVLIRKLLAVMAQEQKLPC
EMTEITIDKENDSSGAIDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSDMDKLMLEK
YPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVT
PWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDATQREAVAKQLLTPSTGIPKPQ
GAKVVCRHVKNGDILLLNRQPTLHRPSIQAHRAHILPEEKVLRLHYANCKAYNADFDGDE
MNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQY
MELVYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYTPLNLTGKAKIGS
KAWVKEKPRPVPDFDPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGET
SGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPNADVMRQRIIEESTQCGPRAVRAALNL
PEAASCDEIQGKWQDAIWRKDQRDFNMIDMKFKEEVNHYSNEINKACMPFGLHRQFPENN
LQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTG
RFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGS
VVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKVLRHFRAIK
KWHHRHSSALLRKGAFLSFSQKIQAAVKALNLEGKTQNGRSPETQQMLQMWHELDEQSRR
KYQKRAAPCPDPSLSVWRPDIHFASVSETFEKKIDDYSQEWAAQAEKSHNRSELSLDRLR
TLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILM
VASANIKTPMMSVPVFNTKKALRRVKSLKKQLTRVCLGEVLQKVDIQESFCMGEKQNKFR
VYELRFQFLPHAYYQQEKCLRPEDILHFMETRFFKLLMEAIKKKNSKASAFRSVNTRRAT
QKDLDDTEDSGRNRREEERDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEG
EEEEEEDVQEEENIKGEGAHQTHEPDEEEGSGLEEESSQNPPCRHSRPQGAEAMERRIQA
VRESHSFIEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHNAIVYTTKGITRCLL
NETINSKNEKEFVLNTEGINLPELFKYSEVLDLRRLYSNDIHAVANTYGIEAALRVIEKE
IKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQA
TMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPLR

Region:1-1716
Length:1716aa
Label:Full sequence
Reset:click