Input sequence

Protein name Pentatricopeptide repeat-containing protein At4g20090
Organism Arabidopsis thaliana Length 660
Disorder content 0.6% ProS content 0.6%
IDEAL NA UniProt O49436

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 660 1-4 5-660 5-660 1-4 1-4 224-512 396-652 124-290 78-652 188-222 223-257 258-292 293-327 328-362 363-397 398-432 433-467 468-502 503-536 541-575 227-442 366-580 81-303 506-656 120-425 325-577 37-52 4wslA(5-293) 1e-58 42.21% 4wslA(2-269) 9e-32 30.88% 4ozsA(14-175) 5e-19 32.34% 4m57A(37-657) 5e-65 18.07% PF01535 3.1e-07 34.7% PF01535 2.8e-11 48.1% PF01535 5e-09 40.6% PF01535 1.8e-12 52.0% PF01535 1.3e-07 35.9% PF01535 3.4e-11 47.8% PF01535 1.6e-10 45.5% PF01535 6.6e-09 40.2% PF01535 1.1e-09 42.8% PF01535 0.00011 26.2% PF01535 1.6e-10 45.6% 2fsqA1(3-214) 5e-33 7.76% 2fsqA1(2-209) 1e-27 7.8% 2fsqA1(2-215) 2e-22 6.67% 2fsqA1(2-130) 2e-09 5.26% a.118.8 2.7e-25 86.8% a.118.8 9.6e-18 56.3%

Sequence

MPKCPIPIRISFFSYFLKESRILSSNPVNFSIHLRFSSSVSVSPNPSMEVVENPLEAPIS
EKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFR
AYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMN
MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE
AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH
GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL
NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL
NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV
GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV
VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE
ELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWRNLCT

Region:1-660
Length:660aa
Label:Full sequence
Reset:click