Input sequence

Protein name DNA polymerase alpha catalytic subunit
Organism Oryza sativa subsp.japonica Length 1534
Disorder content 27.2% ProS content 8.9%
IDEAL NA UniProt O48653

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1534 1-56 57-78 79-345 346-416 417-427 428-709 710-729 730-862 863-866 867-902 903-1234 1235-1238 1239-1243 1244-1304 1305-1318 1319-1323 1324-1357 1358-1363 1364-1372 1373-1488 1489-1494 1495-1534 57-78 346-416 428-709 730-862 903-1234 1244-1304 1324-1357 1373-1488 1495-1534 1-56 79-345 417-427 710-729 867-902 1239-1243 1305-1318 1364-1372 22-56 79-99 150-154 174-184 236-242 316-322 417-427 710-729 872-885 892-897 356-1299 1326-1487 351-1301 1325-1520 905-1276 1326-1530 54-93 381-762 834-1303 896-1233 456-848 375-855 834-1295 4-28 31-52 102-143 192-202 204-213 1098-1115 1079-1106 4q5vA(6-863) 0.0 42.54% 4y97B(2-141) 3e-09 27.44% 4q5vA(1-865) 0.0 40.54% 3floB(1-180) 2e-25 24.76% PF00136(7-379) 3e-48 36.36% PF08996(6-183) 7e-24 35.27% PF12254(26-64) 2e-06 65.0% PF03104 4.2e-18 70.7% PF00136 6.3e-178 601.7% 1q8iA2(2-328) 4e-56 21.27% 1clqA1(5-374) 4e-34 10.75% c.55.3 3.9e-73 244.8% e.8.1 1.6e-124 376.5%

Sequence

MDEGSADAGASGRRSRARGSEAVARSAALERLRAIRDGGARAAAAVQVRIEAPIYDTVAE
EDYAALVARRRKDAGAFIVDDDGLGYADDGREEDWTHRTIHSSSDEGSDGEDGAPRKRKQ
PRPQSKRPPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFRKPGSDRGRDSSLAADSIVDD
VIAEFAPDDNDREERRRRVGRVCAPAPAPTTTAHIKAENVAVDTAMAFRSDNVFEAHEVS
DHGNDMDMELKPDVEMEPKLDTPLGASAELANNSNSLEEPKQEANGEVKIEKVHRLNAKI
KTEDSRNGDMASATAGWMKICGDGDNAGGEGAVAANSNTGVDESSEFELKDGALPFYILD
AYEEPFGANSGTVYLFGKVEVGKRFHSCCVVVKNMQRCIYAIPSSSIFPRDTISRLEKNS
TTSDSSPSLRASLHELASGLKSEIADKLSDFNVSNFAMTPVKRNYAFERTDLPNGEQYVL
KINYPYKDPALPTDLRGQHFHALLGTNNSALELLLIKRKIKGPSWLSISKFLACPATQRV
SWCKFEVTVDSPKDISVLMTSTTLEVPPVVVAAVNLKTIINEKHNVHEIVSASVICCHRV
KIDSPMRSEDWQKRGMLSHFTVMRKLEGSIFPIGLSKESSDRNQKAGSNVLALESSERAL
LNRLMIELSKLDCDVLVGHNISGFDLDVLLHRAQTCKVPSNMWSKIGRLRRSVMPRLTKG
NTLYGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLAETQLKKERKEVSPHDIP
PMFQSSGALLKLVEYGETDACLALELMFHLSVLPLTRQLTNISGNLWGKTLQGSRAQRVE
YLLLHAFHARKFIVPDKFARSKEFNSTKRKMNPDTEAARPDEADPSIDDEGHHVDQGKTK
KGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVDRSADGNVPNLPASK
TTGVLPELLKSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTANSMYGCLGFSNSRFY
AKPLAELITLQGREILQNTVDLVQNNLNLEVIYGDTDSIMIHTGLDDISRAKGIAGKVIQ
EVNKKYRCLEIDLDGIYKRMLLLKKKKYAAIKVALDGSLRENIERKGLDMVRRDWSLLSK
EIGDFCLNQILSGGSCDDVIESIHSSLVQVQEQMRGGQTELEKYIITKSLTKAPEDYPDA
KNQPHVQVALRLKQNGYSGCSAGDTVPYIICSQQDSESTHSGGIAQRARHPEELKRNPDK
WMIDIDYYLSQQIHPVVSRLCASIQGTSPARLAECLGLDSSKFQSRLTESDNQDTSSMLL
SVIDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLIIGSSSGNVSNPNEGNDASINFWRR
MRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMG
DSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFA
ALSQTINLALMEVQKIRDRCAFGWVQLKDLAISI

Region:1-1534
Length:1534aa
Label:Full sequence
Reset:click