Input sequence

Protein name DExH-box ATP-dependent RNA helicase DExH13
Organism Arabidopsis thaliana Length 2172
Disorder content 9.2% ProS content 4.9%
IDEAL NA UniProt O48534

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 2172 1-96 97-194 195-218 219-246 247-266 267-350 351-355 356-373 374-401 402-433 434-2163 2164-2172 97-194 219-246 267-350 374-401 434-2163 1-96 195-218 247-266 356-373 402-433 2164-2172 7-67 77-83 204-218 250-259 367-373 402-408 432-2160 262-378 451-2162 257-378 1842-2154 1007-1309 1353-1500 517-623 811-885 507-686 799-885 1003-1312 1353-1526 1837-2160 2047-2164 1752-1852 914-1018 1868-2046 1044-1207 742-930 1633-1748 1349-1496 491-700 455-700 709-962 1235-1550 1553-1800 125-137 216-242 293-309 379-399 402-423 636-647 1434-1448 1537-1548 219-246 374-401 4f91B(5-1724) 0.0 61.01% 4rvqA(7-121) 3e-11 38.46% 4bgdA(2-1707) 0.0 42.18% 4rvqA(2-121) 2e-18 36.89% PF02889(3-304) 2e-64 44.3% PF02889(2-307) 8e-51 37.74% PF00270(1-148) 2e-06 30.92% PF00270(10-113) 0.001 29.73% PF00271(12-76) 0.001 30.67% PF00270 9.4e-43 152.6% PF00271 6.2e-11 46.9% PF02889 3.3e-175 592.6% PF00270 4.9e-41 146.9% PF02889 1.4e-185 627.1% 2q0zX2(1-114) 4e-33 51.69% 2p6rA1(2-85) 7e-20 15.53% 2p6rA1(2-85) 4e-17 14.02% 2q0zX1(1-176) 1e-19 49.72% 2q0zX1(11-176) 0.0002 24.26% 1gm5A4(1-168) 5e-16 14.81% 2p6rA4(85-198) 2e-05 24.79% 1hv8A1(24-170) 1e-09 21.05% 1hv8A1(10-204) 1e-08 18.22% c.37.1 1.5e-48 145.4% c.37.1 2.6e-32 107.3% c.37.1 5.9e-58 174.0% c.37.1 2.3e-22 74.1%

Sequence

MTNLGGGGAEEQARLKQYGYKVNSSLVLNSDERRRDTHESSGEPESLRGRIDPKSFGDRV
VRGRPHELDERLNKSKKKKERCDDLVSARESKRVRLREVSVLNDTEDGVYQPKTKETRVA
FEIMLGLIQQQLGGQPLDIVCGAADEILAVLKNESVKNHEKKVEIEKLLNVITDQVFSQF
VSIGKLITDYEEGGDSLSGKASEDGGLDYDIGVALECEEDDDESDLDMVQDEKDEEDEDV
VELNKTGVVQVGVAINGEDARQAKEDTSLNVLDIDAYWLQRKISQEYEQKIDAQECQELA
EELLKILAEGNDRDVEIKLLEHLQFEKFSLVKFLLQNRLKVVWCTRLARGRDQEERNQIE
EEMLGLGSELAAIVKELHAKRATAKEREEKREKDIKEEAQHLMDDDSGVDGDRGMRDVDD
LDLENGWLKGQRQVMDLESLAFNQGGFTRENNKCELPDRSFRIRGKEFDEVHVPWVSKKF
DSNEKLVKISDLPEWAQPAFRGMQQLNRVQSKVYGTALFKADNILLCAPTGAGKTNVAVL
TILHQLGLNMNPGGTFNHGNYKIVYVAPMKALVAEVVDSLSQRLKDFGVTVKELSGDQSL
TGQEIKETQIIVTTPEKWDIITRKSGDRTYTQLVRLLIIDEIHLLDDNRGPVLESIVART
LRQIESTKEHIRLVGLSATLPNCDDVASFLRVDLKNGLFIFDRSYRPVPLGQQYIGINVK
KPLRRFQLMNDICYQKVVAVAGKHQVLIFVHSRKETAKTARAIRDTAMANDTLSRFLKED
SQSREILKCLAGLLKNNDLKELLPYGFAIHHAGLTRTDREIVENQFRWGNLQVLISTATL
AWGVNLPAHTVIIKGTQVYNPERGEWMELSPLDVMQMIGRAGRPQYDQQGEGIIITGYSK
LQYYLRLMNEQLPIESQFISKLADQLNAEIVLGTIQNAREACHWLGYTYLYVRMVRNPTL
YGVSPDALAKDLLLEERRADLIHSAATILDKNNLIKYDRKSGHFQVTDLGRIASYYYISH
GTIAAYNENLKPTMNDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKETLEDP
SAKINVLLQVYISKLKLEGLSLTSDMVYITQSAGRLLRAIFEIVLKRGWAQLSQKALNLS
KMVGKRMWSVQTPLWQFPGIPKEILMKLEKNDLVWERYYDLSSQELGELICNPKMGRPLH
KYIHQFPKLKLAAHVQPISRSVLQVELTVTPDFHWDDKANKYVEPFWIIVEDNDGEKILH
HEYFLFKKRVIDEDHTLNFTVPISEPIPPQYFIRVVSDKWLDSPTVLPVSFRHLILPEKY
PPPTELLDLQPLPVMALRNPSYETLYQDFKHFNPVQTQVFTVLYNTSDNVVVAAPTGSGK
TICAEFAILRNHLEGPDSAMRVVYIAPLEAIAKEQFRDWEKKFGKGLGLRVVELTGETLL
DLKLLEKGQIIISTPEKWDALSRRWKQRKYIQQVSLFIVDELHLIGGQGGQVLEVIVSRM
RYISSQVGNKIRIVALSTSLANAKDLGEWIGASSCGVFNFPPNVRPVPLEIHIHGVDILS
FEARMQAMTKPTYTAIVQHAKNKKPAIVFVPTRKHVRLTAVDLIAYSHMDNMKSPDFLLG
NLEELEPFLIQICEETLKETLRHGIGYLHEGLSNLDQEIVTQLFEAGRIQVCVMSSSLCW
GTPLKAHLVVVMGTHFYDGRENSHSDYPISNLLQMMGRGSRPLLDDAGKCVIFCHAPRKE
YYKKFLYEALPVESHLQHFLHDNFNAEVVARVIENKQDAVDYLTWSFMYRRLPQNPNYYN
LLGVSHRHLSDHLSELVENTLSDLEVSKCIEIDNELDLSPLNLGMIASYYYINYTTIERF
SSLLASKTKMKGLLEILTSASEYDLIPIRPGEEDAVRRLINHQRFSFQNPRCTDPRVKTS
ALLQAHFSRQKISGNLVMDQCEVLLSATRLLQAMVDVISSNGCLNLALLAMEVSQMVTQG
MWDRDSMLLQLPHFTKDLAKRCHENPGNNIETIFDLVEMEDDKRQELLQMSDAQLLDIAR
FCNRFPNIDLTYEIVGSNEVSPGKDITLQVLLERDMEGRTEVGPVDAPRYPKTKEEGWWL
VVGEAKTNQLMAIKRISLQRKAQVKLEFAVPTETGEKSYTLYFMCDSYLGCDQEYSFTVD
VKDSDAADHMEE

Region:1-2172
Length:2172aa
Label:Full sequence
Reset:click