Input sequence

Protein name DNA repair protein rad-50
Organism Caenorhabditis elegans Length 1298
Disorder content 9.2% ProS content 8.6%
IDEAL NA UniProt O44199

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1298 1-291 292-318 319-360 361-367 368-457 458-485 486-687 688-691 692-797 798-807 808-852 853-861 862-933 934-950 951-978 979-983 984-1017 1018-1030 1031-1143 1144-1149 1150-1234 1235-1239 1240-1298 1-291 319-360 368-457 486-687 692-797 808-852 862-933 951-978 984-1017 1031-1143 1150-1234 1240-1298 292-318 361-367 458-485 688-691 798-807 853-861 934-950 979-983 1018-1030 292-318 361-367 458-485 688-691 806-807 853-861 934-950 979-983 1018-1030 6-194 199-344 725-838 1159-1258 3-163 989-1132 641-698 1045-1256 3-208 3-1256 297-306 374-388 436-448 504-516 616-646 696-718 856-870 909-926 219-291 319-360 395-457 486-540 565-606 608-649 700-796 808-852 892-933 951-978 1031-1079 3qf7A(5-184) 2e-06 26.02% 4iloA(28-171) 0.0004 25.79% 2i1kA(324-434) 0.001 24.79% 3qf7A(260-345) 8e-12 27.0% 3qf7A(2-147) 5e-11 22.36% 4w8fA(2048-2202) 0.0002 14.19% PF04423 1.5e-17 68.9% 1f2t.1(72-267) 5e-08 13.68% 1f2t.1(2-196) 6e-06 16.35% c.37.1 5.6e-28 95.8%

Sequence

MAKFLRLHIRGIRSVGDEDHDVHKIDFLSPCTLISGPNGTGKTTTIEALNFVTTGQMPTQ
KKQNFIHSTDVARKTRVDASVTLEFIDVKGRECTAVRRLVVTSGTKAAALAEEHTLAIKY
PDGTVNTLSSKVCDFNTALLKHLGVPRAVFKYVIFCHQEDSTWPLSEPKELKKRFDDIFQ
LTKFVKAQERMKKIVLDFKKEMQTHEMSKQLYETHVRDKLVARQNQEECERKISKRKEET
DELKERKANGQKKIEEMRTSIHELEDTLTSFKKTELERQNLKKQLSLIRVEPYFGTEEEL
KREIEEFRGSEGRSYGEERARIQKKIGKNNQERQELSQKKTEFENRISSLKAEVIHCQSL
KYDLERLENQLRSELDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQ
EAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPL
LDENALTECKLKREKYLKQLDILKKKCAEAEKNAEKDREKESLKQTLSIARKKMTAYQRI
YDNNWQGLIGQAPDFPWTPILSKTFHKLRNDKKIMEEDLRDVQLNVQKLETMQHQYRKQE
ESLTAQELKLSENIFEACSCEAEEVSEKLENLRKRLKKARKDLAPLSAKSNLYDSYIEES
KSSGCCPLCDRDFKTKKEINEFSKKLENMTLSFPTEQEELEKLVSKLEKEEIIIVKAEGQ
ANELQRIVKELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQ
QLYEQTEENEKRYEQLVSESDSSDGLSYTELRKKVEDKDEEYRKIVQEGEELQKCSEERN
KLQSKLNELGTHRVSLGEAAAQAGAFAEQLETKIKEIQECITAISQKRNEDLPDAQFKKD
DLTRNVSSKEEEKKKAEMEVQMMKKELDQKIFHRKSLFKKVQEGGLCERQLMDKENNIAT
LNASLEENQQRQKRFEEDLRSFDSSHQRESILKDQLTRMIIENKIKELKRTLATFDGQIN
EDRITEQKQAYNKLQNELRLIGNEEVKIYTQMQEYEKQKKIAEAKLSTKECQNAESNYRD
AIIELAITKESISDLTKYRNCLDASLIQFHSEKMGRVNGIIDDLWRKVYNSTDITTIRIR
SDATSETSSKKVAYEYNVMMVHETGTEVEMRGRCSAGQKMLASLLIRIALAEVFGGSCSM
IALDEPTTNLDESKVEGMAIVLADIIAERRGFDENGKLRGRDMQMVVITHDERLVNRITI
SCRPEYIYCLGKDEHGISFLSKRYPDGTVKRVNTKRRF

Region:1-1298
Length:1298aa
Label:Full sequence
Reset:click