Input sequence

Protein name Rab GTPase-binding effector protein 1
Organism Rattus norvegicus Length 862
Disorder content 39.7% ProS content 30.4%
IDEAL NA UniProt O35550

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam SEG:LCR COILS:coiledCoil 0 862 1-10 11-105 106-132 133-229 230-230 231-279 280-535 536-655 656-698 699-857 858-862 11-105 133-229 231-279 536-655 699-857 1-10 106-132 230-230 280-535 656-698 858-862 106-132 280-358 366-388 395-421 444-456 470-490 506-535 662-698 858-862 552-641 804-849 12-218 552-641 804-849 126-311 469-596 540-785 20-291 89-199 450-600 163-173 314-327 11-105 133-229 231-279 536-655 699-817 1x79B(1-90) 2e-39 92.22% 1tu3F(1-46) 2e-17 100.0% 1c1gA(44-248) 0.0009 24.22% 1x79B(1-90) 2e-15 92.22% 1tu3F(1-46) 5e-08 100.0% 2dfsA(821-992) 2e-06 20.97% PF03528(9-108) 1e-06 52.34% PF12128(608-852) 7e-05 24.1% PF12128(452-710) 0.0005 24.19% PF03528 2.2e-59 207.9% PF03528 4.3e-105 359.7%

Sequence

MAQPGPAPQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQ
NAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAV
MKETVRDYEHQFHLRLEQERAQWAQYRESADREIADLRRRLSEGQEEENLENEMKKAQED
AEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAV
LNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQR
MEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDNKKIDTEEEVKIPVVCALTQEESSTP
LSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSDNDMFKEGLRRAQSTDSLGTSSSLQSK
ALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTVSLGSLQMPSGFMLTKDQERAIKAMT
PEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYE
KQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALV
LRAQASEVLLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHV
SLQLAEDFILPDTVQVLRELVLKYRENIVHVRTAADHMEEKLKAEILFLKEQIQAEQCLK
ENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKVNLE
EQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS
LERIRAILNDTKLTDINQLPET

Region:1-862
Length:862aa
Label:Full sequence
Reset:click