Input sequence

Protein name Medium-wave-sensitive opsin 1
Organism Rattus norvegicus Length 359
Disorder content 12.5% ProS content 9.2%
IDEAL NA UniProt O35476

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 359 1-18 19-250 251-254 255-336 337-359 19-250 255-336 1-18 251-254 337-359 1-18 251-254 349-359 16-309 302-326 16-310 66-317 65-317 16-334 15-359 335-357 50-72 85-107 122-144 164-186 217-239 265-287 297-319 1f88A(2-294) 4e-12 20.54% 1fdfA(1-25) 6e-05 60.0% 1f88A(2-295) 1e-45 20.13% PF00001(1-253) 7e-24 28.68% PF00001 2.7e-47 167.7% 1f88A(2-319) 5e-28 40.37% f.13.1 1e-76 255.8%

Sequence

MAQQLTGEQTLDHYEDSTQASIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSTWMILVVI
ASVFTNGLVLAATMRFKKLRHPLNWILVNLAVADLAETIIASTISVVNQIYGYFVLGHPL
CVIEGYIVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLATVGIVFSWVWAAVWTA
PPIFGWSRYWPYGLKTSCGPDVFSGTSYPGVQSYMMVLMVTCCIFPLSIIVLCYLQVWLA
IRAVAKQQKESESTQKAEKEVTRMVVVMVFAYCLCWGPYTFFACFATAHPGYAFHPLVAS
LPSYFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVDDSSELSSTSKTEVSSVSSVSPA

Region:1-359
Length:359aa
Label:Full sequence
Reset:click